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Report for CCDS37610.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
37610.2 |
Public |
Mus musculus |
17 |
H2-T26 |
23 |
108 |
98 |
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Public Note for CCDS 37610.1 |
The coding region has been updated to represent an alternative splicing pattern that is more supported by the available transcript data. |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 37610.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000040467.14 |
ENSMUSP00000036092.8 |
Accepted |
alive |
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NCBI |
NM_001081032.2 |
NP_001074501.2 |
Updated |
not alive |
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NCBI |
NM_001081032.3 |
NP_001074501.2 |
Accepted |
alive |
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Chromosomal Locations for CCDS 37610.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1107 nt): ATGGCACCGCGAACGCTGCTCCTGCTGCTGGCCGCTGCCCTGATACTGACGGAGACACGCGCGGTGTCCC GGCCCGGCCCACACTCGATGCGGTATTTCGAGACCGCCGTGTCCCGGCCCGGCCTCGGGGAGCCCTGGTT CATCTCTGTCGGCTACGTGGACGACACGCAGTTCGTGCGCTTCGACGGCGACGCGGAGAATCCGAGGATG GAGCCGCGGGCGCCCTGGATGGAGCAGGAGGGGCCGGAGTATTGGGAGCGGGAGACACAGATCGCCAAGG GCCATGAGCAGGGTTTCCAAGGGAGCCTGAGGAACCTGCTCCACTACTACAACCAGAGCGCGGGCGGCTC TCACACATTTCAGAGGATGTACGGCTGTGACCTGGGGTCGGACGGGCGCCTCCTCCGCGGGTACTGGCAG TTCGCTTACGACGGCAGCGATTACATCGCCCTGAACCAAGACCTGAAAACGTGGACGGCGGCGGACTTGG CGGCGCAGATCACTCGACGCAGGTGGGAGCAGGGTGGTGTTGCAGAGACGCTCAGGGCCTACCTGGAGGA CCCGTGCCTGGAGTGGCTCCGCAGATACCTGGAGCTCGGGAAGGAGACGCTGCTGCGCACAGATCCCCCA AAGGTACATGTGACCCATCATCCCAGATCTGAAGATGATGTCACCCTGAGGTGCTGGGCCCTGGGTTTCT ACCCTGCTGACATCACCCTGACCTGGCAGTTGAATGGGGAGGAGCTGACCCAGGACATGGAGCTTGTGGA GACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGCATCTGTGGTGGTGCCTCTTGGAAAGGAGCAG AATTACACATGCCATGTGTACCATGAGGGGCTGCCTGAGCCCCTCACCCTGAGATGGGAGCCTCGTCCAT CCAGGGACTCCAACATGGTAATCATAGCTGTTCTGGTTGTCCTTGGAGTTGTGATCATCATTGGAGCTAT GGTGCCTTTTGTGTTGAAGAGCAGGAGAAAAATAGGTGGAAAAGAAGAGAACTATGCTCTGGCTGGAGGC AGCAACAGTGTCCAGGGCTCTGCCTTGTTTCTGGAGGCCTTCAGCCATCCTTCCTGA
Translation (368 aa): MAPRTLLLLLAAALILTETRAVSRPGPHSMRYFETAVSRPGLGEPWFISVGYVDDTQFVRFDGDAENPRM EPRAPWMEQEGPEYWERETQIAKGHEQGFQGSLRNLLHYYNQSAGGSHTFQRMYGCDLGSDGRLLRGYWQ FAYDGSDYIALNQDLKTWTAADLAAQITRRRWEQGGVAETLRAYLEDPCLEWLRRYLELGKETLLRTDPP KVHVTHHPRSEDDVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQ NYTCHVYHEGLPEPLTLRWEPRPSRDSNMVIIAVLVVLGVVIIIGAMVPFVLKSRRKIGGKEENYALAGG SNSVQGSALFLEAFSHPS
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