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Report for CCDS36499.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
36499.2 |
Public |
Mus musculus |
12 |
Ttll5 |
23 |
108 |
98 |
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Public Note for CCDS 36499.2 |
The coding region has been updated to represent an alternate splice pattern that is more supported by the available transcript and protein data. The update includes extension of the 5' CDS, affects splicing in the 3' CDS, and changes the protein length from 1355 aa to 1328 aa. |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 36499.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000040179.13 |
ENSMUSP00000048809.7 |
Accepted |
alive |
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NCBI |
NM_001081423.3 |
NP_001074892.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001074892.2 |
1328 |
Q8CHB8-1 |
1328 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 36499.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3987 nt): ATGCCAGTTGTGATGGCCCGGGACCTGGAGGAGACAGCATCGTCCTCAGAGGACGAGGACCTGGCCAACC AAGAGGATCACCCATGTATTATGTGGACTGGAGGCTGCAGGAGAATTCCAGTTTTGGTTTTCCATGCTGA GGCTATTTTGACAAAGGACAACAATATTCGAGTAATTGGAGAGCGTTATCATTTGTCTTATAAGATTGTG AGAACGGACAGTCGCCTGGTGCGAAGCATTCTGACAGCCCATGGATTTCATGAAGTTCACCCGAGCAGCA CTGACTATAATTTGATGTGGACAGGATCCCACCTAAAACCGTTCTTACTTCGAACCCTCTCTGAAGCACA AAAGGTTAATCATTTCCCCAGGTCTTATGAACTAACCCGCAAGGACCGACTGTACAAAAACATCATTCGG ATGCAGCACACTCATGGATTCAAAGCATTCCACATCCTCCCTCAGACCTTTCTCCTGCCAGCTGAGTATG CAGAATTCTGTAATTCATATTCAAAGGACCGAGGACCTTGGATAGTAAAACCAGTGGCCTCTTCTAGGGG GCGGGGCGTCTACTTGATCAACAACCCAAACCAGATCTCCCTGGAAGAGAACATCTTGGTCTCCCGTTAC ATTAACAACCCCCTGCTCATAGATGATTTCAAGTTTGACGTGCGCCTCTATGTGCTCGTGACTTCCTATG ATCCCCTTGTCATCTATCTCTATGAGGAAGGACTGGCTAGGTTTGCAACTGTGCGTTATGATCAAGGCTC CAAGAACATCCGCAACCAGTTCATGCACCTGACGAACTACAGCGTGAACAAGAAGAGTGGAGACTATGTG AGTTGTGATGACCCAGAAGTGGAGGATTATGGGAACAAGTGGAGCATGAGTGCCATGCTTAGGTACCTGA AACAAGAAGGCAAGGACACAACTGCATTGATGGCCCATGTGGAAGACCTGATCATTAAGACAATAATCTC TGCTGAACTAGCTATCGCCACTGCCTGTAAAACCTTTGTTCCACACCGCAGCAGTTGTTTTGAACTGTAT GGCTTTGATGTGCTCATAGATAATACTCTGAAGCCATGGTTGTTGGAAGTGAATCTCTCTCCTTCTTTGG CCTGTGATGCTCCTCTGGATCTAAAGATTAAAGCCAGTATGATCTCAGACATGTTCACTGTTGTAGGATT TGTGTGCCAAGATCCTGCCCAGCGGACATCCAACCGGTCAATTTATCCCAGTTTTGAGTCTTCCAGGCGG AACCCTTTTCAGAAACCTCAGCGCACCCGTCCACTCTCTGCCAGTGATGCAGAAATGAAAAACCTTGTGG CCTCAGCCCGGGAGAAGGTACCGGGGAAGTTAGGCGGTTCTGTGCTTGGTCTGTCAATGGAGGAGATCAA AGTTCTCCGGAGGGTAAAGGAGGAGAATGATCGGAGAGGAGGGTTTATTCGCATATTTCCTACATCGGAG ACATGGGAAATATATGGGTCCTACCTTGAACACAAAACCTCCATGAACTACATGCTGGCAACACGCCTAT TCCAGGACAGAGGAAACCCCAGAAGGAGCTTGCTGACAGGAAGAGCACGAGTGAGCACGGAAGGAGCACC AGAGCTAAAGGTGGAGAGCATGAACTCCAAGGCCAAGCTGCATGCCGCTCTCTATGAGAGGAAGCTACTG TCTCTGGAGGTGCGAAAACGTAGACGACGGAGTGGCAGATTGAGGGCAATGAGGCCAAAATACCCAGTGA TTGCCCAACCAGCTGAAATGAATATTAAAACCGAGACAGAGAGTGAAGAGGAGGAAGAAGTTGGATTAGA CAATGACGATGAAGAGCAGGAAGCATCCCAGGAGGAGTCTGCAGGGTCTCTTGGAGAAAATCAAGCCAAG TACACACCTTCATTGACTGTTATAGTAGAAAATTCGCCCAGAGACAATGCAATGAAAGTTGCCGAGTGGA CTAATAAAGGTGAACCGTGCTGCAAAATCGAGGCTCAGGAGCCAGAGTCTAAATTCAACCTGATGCAGAT TCTCCAGGACAATGGCAATCTAAGCAAAGTACAGGCCCGGTTAGCATTCTCTGCCTATCTTCAGCATGTG CAAATCCGTCTGACAAAAGACAGTGGTGGTCAGACACTCAGTCCCAGCTGGGCTGCCAAAGAGGATGAAC AGATGGAACTGGTGGTTCGTTTTCTCAAGCGAGCGTCAAGTAACCTCCAGCACTCGCTGAGGATGGTATT GCCTAGTCGGCGGTTGGCACTTCTGGAGCGCAGGAGAATCCTTGCCCACCAGCTAGGAGACTTTATCGGT GTGTACAACAAGGAAACAGAACAAATGGCTGAAAAGAAATCAAAGAAGAAACTTGAAGAAGAGGAAGAAG ATGGGGTGAACGCAGAAAGCTTTCAGGAGTTTATTCGACAAGCAAGTGAGGCTGAACTGGAGGAGGTGTT GACTTTTTATACCCAAAAAAACAAGTCTGCCAGTGTCTTCCTGGGGACTCACTCGAAAAGCTCTAAGAAC AGCAGTAGTTACTCTGATAGTGGGGCAAAAGGTGATCACCCTGAGACCATACAAGAAGTGAAAATAAAGC AACCCAAACAGCAACAGGCAACAGAAATCCACGCCGATAAATTATCTCGATTTACCACTTCATCAGGAAA AGAGGCGAAACTAGTGTATACCAATTGCTCTTCTTTCTGCAGTCCTGCTGCTGTTCTTCTGCAGAGACTC CCCAGCTCCCATCTGTCGTCCGTGATCACAACCTCTGCCCTCTCGGCAGGCCCTGGCCACCATGCTTCTC TATCTCAAATCCCTCCAGCTGTCCCCAGCCTGCCTCACCAGCCAGCACTGCTACTGAGCCCCGTTCCTGA CAATGCCCCTCCCTCCATACACTCTGGAACCCAGAATGTAAGCCCTGCGGGGCTGCCACGCTGTCGATCC GGCAGCTACACCATTGGCCCCTTTTCCTCTTTCCAAAGTGCCGCACATATCTATAGCCAGAAACTGTCTC GTCCCTCCTCAGCAAAGGCAGCAGGGTCATGTCATCCACACAAGCATCATTCAGGAATTGCCAAAACACA AAAAGAGGGTGAAGATGTTTCATTAAACAGGAGGTACAACCAAAGTCTGGTTACGGCTGAACTCCAGCGG CTCGCGGAGAAGCAGGCAGCCAGGCAGTATTCTCCAGCCAGTCACATCAGTCTCCTCACTCAGCAGGTGA CAAACCTGAATTTGGCCAGCAGTGTCATAAACAGAAGCAGTGCATCCACCCCCCCTACCCTTCGGCCTGT CATCAGTCCTAGTGGCCCAACGTGGTCTATACAGCCAGACCTCCACGCTTCTGAGACCCACTCCAGCCCC CCTGGAAGCAGGAGCCTCCAGACAGGTGGCTTTGCCTGGGAGGGCGAGGTAGAGAACAACGCATACAGCA AGACTACAGGGGTGGTCCCCCAGCACAAGTACCACCCCACAGCAGGCAGCTACCAGCTCCACTTTGCTCT CCAGCAACTCGAGCAACAAAAACTTCAGTCCCGGCAACTTCTGGACCAGAGTCGAGCCCGGCACCAGGCA ATCTTTGGCAGCCAGACACTACCTAACTCCAGTTTATGGACAATGAATAATGGTCCAGGCTGCAGAATTT CAAGTGCCACAACTGGTGGCCAGAAGCCAAACACCCTGCCACAAAAAGTAGTGGCACCTCCAAATTCATC CACCTTGGTCTCCAAGCCTGCATCCAATCACAAGCAAGTGCTCAGAAAGCCGGCATCCCAGAGGGCTTCC AAAGGGTCCTCTGCAGAAGGGCAGCTGAACGGTCTCCAGAGCAGCCTTAACCCTGCAGCCTTCATGCCCA TCACCAACTCCACAGGATCTTTGGAAGCTCCCCAAGTTATTTTCGCAAGATCCAAACCCTTACCCACACA GTCTGGAGCCCTTGCTACAGTTATAGGACAGAGAAAATCAAAGTCGGTGAAGTCAGGGACAATTTAA
Translation (1328 aa): MPVVMARDLEETASSSEDEDLANQEDHPCIMWTGGCRRIPVLVFHAEAILTKDNNIRVIGERYHLSYKIV RTDSRLVRSILTAHGFHEVHPSSTDYNLMWTGSHLKPFLLRTLSEAQKVNHFPRSYELTRKDRLYKNIIR MQHTHGFKAFHILPQTFLLPAEYAEFCNSYSKDRGPWIVKPVASSRGRGVYLINNPNQISLEENILVSRY INNPLLIDDFKFDVRLYVLVTSYDPLVIYLYEEGLARFATVRYDQGSKNIRNQFMHLTNYSVNKKSGDYV SCDDPEVEDYGNKWSMSAMLRYLKQEGKDTTALMAHVEDLIIKTIISAELAIATACKTFVPHRSSCFELY GFDVLIDNTLKPWLLEVNLSPSLACDAPLDLKIKASMISDMFTVVGFVCQDPAQRTSNRSIYPSFESSRR NPFQKPQRTRPLSASDAEMKNLVASAREKVPGKLGGSVLGLSMEEIKVLRRVKEENDRRGGFIRIFPTSE TWEIYGSYLEHKTSMNYMLATRLFQDRGNPRRSLLTGRARVSTEGAPELKVESMNSKAKLHAALYERKLL SLEVRKRRRRSGRLRAMRPKYPVIAQPAEMNIKTETESEEEEEVGLDNDDEEQEASQEESAGSLGENQAK YTPSLTVIVENSPRDNAMKVAEWTNKGEPCCKIEAQEPESKFNLMQILQDNGNLSKVQARLAFSAYLQHV QIRLTKDSGGQTLSPSWAAKEDEQMELVVRFLKRASSNLQHSLRMVLPSRRLALLERRRILAHQLGDFIG VYNKETEQMAEKKSKKKLEEEEEDGVNAESFQEFIRQASEAELEEVLTFYTQKNKSASVFLGTHSKSSKN SSSYSDSGAKGDHPETIQEVKIKQPKQQQATEIHADKLSRFTTSSGKEAKLVYTNCSSFCSPAAVLLQRL PSSHLSSVITTSALSAGPGHHASLSQIPPAVPSLPHQPALLLSPVPDNAPPSIHSGTQNVSPAGLPRCRS GSYTIGPFSSFQSAAHIYSQKLSRPSSAKAAGSCHPHKHHSGIAKTQKEGEDVSLNRRYNQSLVTAELQR LAEKQAARQYSPASHISLLTQQVTNLNLASSVINRSSASTPPTLRPVISPSGPTWSIQPDLHASETHSSP PGSRSLQTGGFAWEGEVENNAYSKTTGVVPQHKYHPTAGSYQLHFALQQLEQQKLQSRQLLDQSRARHQA IFGSQTLPNSSLWTMNNGPGCRISSATTGGQKPNTLPQKVVAPPNSSTLVSKPASNHKQVLRKPASQRAS KGSSAEGQLNGLQSSLNPAAFMPITNSTGSLEAPQVIFARSKPLPTQSGALATVIGQRKSKSVKSGTI
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