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Report for CCDS29942.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29942.1 Public Mus musculus 19 Dennd10 23 108 98 CCDS HistoryNCBI Gene:67894Re-query CCDS DB by CCDS ID:29942.1Re-query CCDS DB by GeneID:67894See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29942.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025957.8 ENSMUSP00000025957.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025957.8Link to Ensembl Protein Viewer:ENSMUSP00000025957.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000025957Re-query CCDS DB by Protein ID:ENSMUSP00000025957
Original member NCBI NM_026437.4 NP_080713.2 Updated not alive Link to Nucleotide Sequence:NM_026437.4Link to Protein Sequence:NP_080713.2Re-query CCDS DB by Nucleotide ID:NM_026437Re-query CCDS DB by Protein ID:NP_080713
Current member NCBI NM_026437.5 NP_080713.2 Accepted alive Link to Nucleotide Sequence:NM_026437.5Link to Protein Sequence:NP_080713.2Re-query CCDS DB by Nucleotide ID:NM_026437Re-query CCDS DB by Protein ID:NP_080713Link to BLAST:NP_080713.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080713.2 357 Q9D8N2 357 100% 0 0

Chromosomal Locations for CCDS 29942.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 60811619 60811673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 60814612 60814808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 60817531 60817610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 60821207 60821355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 60822295 60822406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 60825831 60825931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 60830787 60830894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 60832584 60832678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 60834826 60835002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1074 nt):
ATGGCTGCGGTTGTGGCAATGGACACCCAGCTGATGCTCGGAGTCGGGCTGATCGAAAAGGACTCTAATG
GAGAAGCCCTGTGGGTGTGGTGTTATCCTTCCACGACAGCCTCACTAAGGAATCTGCTGCTCCGAAAATG
CTGCCTAACTGATGAAAACAAACTTCTCCACCCTTTCGTCTTTGGTCAGTACAGAAGAACATGGTTTTAT
GTCACGACAGTTGAAGTTCCAGATTCTTCAGTTTTGAAAAAGGTGACTCATTTTTCTATTGTTCTGACCG
CCAAAGATTTTAACCCAGAGAAATATGCCGCCTTCACTAGGATATTGTGTAGAATATATTTGAAATATGG
AAGTCCGGTTAAAATGATGGAGAGTTACATTGCAGTTCTCACCAAGGGGATCTGCCAGAGTGAAGAAAAT
GGCTCTTTCCTTAGTAGAGACTTTGATGGTCGAAAGGCATACCTTGCTGGCTCCATCAAAGACATTGTAT
CTCAATTTGGAATGGAAACTGTTATTTTACACACAGCATTGATGCTGAAAAAACGAATTGTTGTCTATCA
CCCCAAAATAGAAGCTGTCCAGGAGTTCACCAGGACTCTGCCTGCCCTGGTGTGGCATCGACAGGATTGG
ACCATCCTGCATTCTTACATGCACCTTCATGCTGAAGAGCTAGAAGGCCTACAGATGTGCACAGGCTACA
TTGCTGGCTTTGTAGAATTGGAGGTGAGCAACAGACCAGACCTCTATGACGTGTTTGTGAATCTGGCAGA
TAGTGAGATCACCATCGCTCCACTTGCAAAAGAGGCCATGACGATGGGCAAACTGCATAAAGAGATTGGT
CAACTAATTGTGCAATCTGCAGAAGACCCAGAGAAATCAGACAGCCAGGTTATACAGGACATTGCCCTAA
AAACAAAAGAAATCTTCACTCACCTGGCACCATTCTCAGAAGTGTCTGATGATGGGGGAAAAGTCATCCT
CAATGTTGAGGCACTGAAGCAGCAGCGATTTCCACCCGCAACAGAAAACTTCCTGTATCATCTAGCAGCA
GCTGAACAAATGCTGAAGGTCTGA

Translation (357 aa):
MAAVVAMDTQLMLGVGLIEKDSNGEALWVWCYPSTTASLRNLLLRKCCLTDENKLLHPFVFGQYRRTWFY
VTTVEVPDSSVLKKVTHFSIVLTAKDFNPEKYAAFTRILCRIYLKYGSPVKMMESYIAVLTKGICQSEEN
GSFLSRDFDGRKAYLAGSIKDIVSQFGMETVILHTALMLKKRIVVYHPKIEAVQEFTRTLPALVWHRQDW
TILHSYMHLHAEELEGLQMCTGYIAGFVELEVSNRPDLYDVFVNLADSEITIAPLAKEAMTMGKLHKEIG
QLIVQSAEDPEKSDSQVIQDIALKTKEIFTHLAPFSEVSDDGGKVILNVEALKQQRFPPATENFLYHLAA
AEQMLKV


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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