NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS29777.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29777.1 Public Mus musculus 19 Kif11 23 108 98 CCDS HistoryNCBI Gene:16551Re-query CCDS DB by CCDS ID:29777.1Re-query CCDS DB by GeneID:16551See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29777.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000012587.3 ENSMUSP00000012587.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000012587.3Link to Ensembl Protein Viewer:ENSMUSP00000012587.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000012587Re-query CCDS DB by Protein ID:ENSMUSP00000012587
Original member Current member NCBI NM_010615.2 NP_034745.1 Accepted alive Link to Nucleotide Sequence:NM_010615.2Link to Protein Sequence:NP_034745.1Re-query CCDS DB by Nucleotide ID:NM_010615Re-query CCDS DB by Protein ID:NP_034745Link to BLAST:NP_034745.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034745.1 1052 Q6P9P6 1052 100% 0 0

Chromosomal Locations for CCDS 29777.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37376594 37376667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37384240 37384372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37384542 37384639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37384732 37384810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37387017 37387202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37387311 37387435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37390312 37390402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37390649 37390891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37393685 37393780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37398119 37398207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37402205 37402292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37403461 37403649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37404114 37404321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37406994 37407166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37409476 37409601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37409726 37409884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37410527 37410633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37411331 37411610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37413121 37413343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37416490 37416632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37417901 37418017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37420259 37420390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3159 nt):
ATGGCGTCCCAGCCGAGTTCTTTGAAGAAGAAAGAGGAAAAGGGCAGGAACATCCAGGTGGTGGTGAGAT
GCAGACCATTTAATCTGGCAGAGCGGAAAGCTAATGCCCACTCAGTAGTGGAATGTGACCATGCACGGAA
AGAAGTCAGTGTACGGACTGCAGGGTTGACGGACAAGACCTCCAAGAAAACATACACGTTTGATATGGTG
TTTGGAGCATCTACAAAACAAATTGATGTTTACCGAAGTGTTGTTTGTCCAATTCTAGATGAAGTTATTA
TGGGCTATAATTGCACCATCTTCGCATATGGTCAGACTGGCACTGGAAAAACTTTTACAATGGAAGGTGA
AAGGTCACCTAATGAAGTATATACCTGGGAGGAGGATCCTCTGGCTGGTATAATTCCACGCACTCTTCAT
CAAATTTTTGAGAAACTTACTGATAATGGCACTGAGTTTTCAGTTAAAGTGTCCCTATTGGAAATCTATA
ATGAGGAGCTTTTTGATCTTCTTAGTCCATCTTCTGATGTTTCTGAAAGGCTGCAGATGTTTGATGATCC
CCGGAACAAGAGAGGAGTGATAATCAAAGGCTTAGAGGAAATCACAGTACACAATAAAGATGAAGTCTAC
CAAATCTTAGAGAAGGGAGCAGCAAAAAGGACAACTGCAGCAACCTTGATGAATGCTTACTCTAGTCGTT
CACACTCAGTTTTTTCTGTTACGATACACATGAAAGAAACAACAATTGATGGAGAAGAGCTTGTTAAAAT
TGGAAAGTTGAATTTGGTTGATCTTGCAGGAAGTGAAAATATTGGGCGTTCTGGAGCTGTTGACAAGAGG
GCCCGGGAAGCTGGAAATATCAACCAATCCCTCTTGACTCTGGGAAGAGTTATTACTGCTCTTGTGGAAA
GAACACCTCATATTCCTTATCGAGAATCTAAACTAACTAGAATCCTGCAAGATTCTCTTGGGGGACGTAC
AAGAACATCTATAATTGCAACCATTTCCCCTGCATCTTTCAATCTTGAGGAAACTCTGAGTACATTGGAA
TATGCTCACAGAGCAAAGAACATAATGAATAAGCCTGAAGTTAATCAAAAACTCACCAAAAAAGCTCTTA
TTAAGGAGTATACAGAAGAGATAGAGCGTTTGAAGCGAGATCTTGCAGCAGCTCGTGAGAAAAATGGAGT
GTACATCTCTGAAGAAAGTTTTAGAGCCATGAATGGAAAGGTAACTGTTCAGGAGGAACAAATTGTTGAG
TTGGTTGAAAAAATCGCTGTTCTTGAGGAGGAGCTCAGTAAGGCTACAGAGTTATTTATGGATAGTAAGA
ACGAACTTGACCAGTGTAAATCTGACCTGCAAACCAAGACACAGGAACTTGAAACCACTCAGAAACATTT
GCAAGAAACAAAATTACAACTGGTTAAAGAGGAATATGTCTCTTCAGCCTTGGAAAGAACCGAGAAGACA
CTGCATGACACGGCCAGCAAGTTGCTTAACACGGTTAAAGAAACCACCAGGGCTGTATCTGGTCTACATT
CTAAACTGGACCGCAAGAGAGCAATCGATGAGCACAACGCTGAAGCTCAGGAGAGCTTTGGCAAAAACCT
CAACAGTCTGTTTAATAATATGGAAGAATTGATTAAGGATGGCAGTGCGAAACAAAAGGCCATGCTAGAC
GTTCATAAGACACTGTTTGGTAACCTGATGTCTTCTAGTGTCTCTGCATTAGACACCATTACCACGACAG
CACTTGAATCTCTCGTGTCTATTCCAGAAAATGTGTCCGCTCGTGTTTCTCAGATTTCTGATATGATATT
GGAAGAGCAATCGTTAGCAGCACAAAGTAAAAGTGTTCTGCAAGGATTGATTGATGAACTTGTGACCGAC
CTTTTCACTTCCCTGAAGACCATCGTAGCCCCTAGTGTGGTTTCCATCTTGAACATAAATAAGCAGCTAC
AGCATATTTTCAGGGCTTCATCGACAGTGGCTGAAAAGGTAGAAGATCAAAAAAGAGAAATAGACAGTTT
TCTCAGCATATTGTGTAACAATTTACATGAACTCCGAGAAAACACAGTTTCTTCCTTGGTTGAATCACAA
AAGCTTTGTGGAGACCTAACTGAAGACCTGAAGACAATAAAGGAAACCCATTCACAGGAACTTTGCCAGT
TAAGCAGTAGTTGGGCAGAGAGATTCTGTGCTTTGGAGAAGAAGTATGAAAACATCCAGAAACCACTGAA
CAGTATTCAAGAAAATACAGAGCTGAGGTCTACTGATATAATCAATAAAACAACAGTTCACAGTAAGAAA
ATTCTTGCTGAATCTGATGGATTATTACAAGAACTCAGACACTTTAACCAAGAAGGCACACAGCTGGTTG
AAGAGTCTGTAGGACACTGCAGTTCACTCAACAGCAACCTGGAGACTGTATCCCAAGAGATCACCCAGAA
GTGTGGGACCCTGAACACAAGCACAGTTCATTTCTCTGATCAGTGGGCATCCTGCCTAAGCAAGAGAAAG
GAAGAACTTGAGAATTTAATGGAGTTTGTAAATGGCTGTTGTAAAGCTTCAAGTTCGGAGATCACTAAGA
AAGTAAGAGAACAGAGCGCAGCTGTTGCGAACCAGCACAGCTCCTTTGTTGCTCAGATGACTTCCGATGA
AGAAAGCTGTAAAGCAGGAAGCCTGGAGCTTGATAAAACTATAAAGACTGGGTTAACAAAGCTGAATTGC
TTTCTGAAACAGGATCTGAAACTAGATATCCCAACAGGTATGACACCAGAGAGGAAAAAATATTTATATC
CAACAACACTTGTGAGAACTGAACCACGAGAGCAGCTCCTTGATCAGCTGCAAAAGAAACAACCACCAAT
GATGCTAAACAGCTCAGAAGCCAGCAAGGAGACCAGTCAGGACATGGATGAAGAGAGGGAGGCTCTGGAG
CAGTGTACTGAGGAACTTGTAAGTCCAGAGACAACTGAACATCCCAGTGCAGATTGCTCTTCCAGCAGAG
GTCTTCCATTTTTCCAGCGAAAAAAGCCACATGGAAAAGACAAAGAAAACAGAGGCCTTAACCCGGTGGA
GAAGTATAAAGTGGAAGAGGCCTCGGATCTCTCCATCTCCAAGAGCAGACTGCCGCTTCACACCTCCATA
AACCTCTAG

Translation (1052 aa):
MASQPSSLKKKEEKGRNIQVVVRCRPFNLAERKANAHSVVECDHARKEVSVRTAGLTDKTSKKTYTFDMV
FGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEVYTWEEDPLAGIIPRTLH
QIFEKLTDNGTEFSVKVSLLEIYNEELFDLLSPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVY
QILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKR
AREAGNINQSLLTLGRVITALVERTPHIPYRESKLTRILQDSLGGRTRTSIIATISPASFNLEETLSTLE
YAHRAKNIMNKPEVNQKLTKKALIKEYTEEIERLKRDLAAAREKNGVYISEESFRAMNGKVTVQEEQIVE
LVEKIAVLEEELSKATELFMDSKNELDQCKSDLQTKTQELETTQKHLQETKLQLVKEEYVSSALERTEKT
LHDTASKLLNTVKETTRAVSGLHSKLDRKRAIDEHNAEAQESFGKNLNSLFNNMEELIKDGSAKQKAMLD
VHKTLFGNLMSSSVSALDTITTTALESLVSIPENVSARVSQISDMILEEQSLAAQSKSVLQGLIDELVTD
LFTSLKTIVAPSVVSILNINKQLQHIFRASSTVAEKVEDQKREIDSFLSILCNNLHELRENTVSSLVESQ
KLCGDLTEDLKTIKETHSQELCQLSSSWAERFCALEKKYENIQKPLNSIQENTELRSTDIINKTTVHSKK
ILAESDGLLQELRHFNQEGTQLVEESVGHCSSLNSNLETVSQEITQKCGTLNTSTVHFSDQWASCLSKRK
EELENLMEFVNGCCKASSSEITKKVREQSAAVANQHSSFVAQMTSDEESCKAGSLELDKTIKTGLTKLNC
FLKQDLKLDIPTGMTPERKKYLYPTTLVRTEPREQLLDQLQKKQPPMMLNSSEASKETSQDMDEEREALE
QCTEELVSPETTEHPSADCSSSRGLPFFQRKKPHGKDKENRGLNPVEKYKVEEASDLSISKSRLPLHTSI
NL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH