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Report for CCDS26818.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26818.1 Public Mus musculus 14 Fezf2 23 108 98 CCDS HistoryNCBI Gene:54713Re-query CCDS DB by CCDS ID:26818.1Re-query CCDS DB by GeneID:54713See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26818.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022262.5 ENSMUSP00000022262.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022262.5Link to Ensembl Protein Viewer:ENSMUSP00000022262.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022262Re-query CCDS DB by Protein ID:ENSMUSP00000022262
Original member Current member EBI ENSMUST00000224714.1 ENSMUSP00000153090.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000224714.1Link to Ensembl Protein Viewer:ENSMUSP00000153090.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000224714Re-query CCDS DB by Protein ID:ENSMUSP00000153090
Original member Current member NCBI NM_080433.3 NP_536681.2 Accepted alive Link to Nucleotide Sequence:NM_080433.3Link to Protein Sequence:NP_536681.2Re-query CCDS DB by Nucleotide ID:NM_080433Re-query CCDS DB by Protein ID:NP_536681Link to BLAST:NP_536681.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_536681.2 455 Q9ESP5 455 100% 0 0

Chromosomal Locations for CCDS 26818.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 12342496 12342758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 12343639 12343771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 12343918 12344052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 12344349 12345185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1368 nt):
ATGGCCAGCTCAGCTTCCCTGGAGACCATGGTGCCCCCGGCCTGCCCGCGCGCTGGAGCGTCACCGGCCA
CTTCTAAAACACTAGCTTTCTCTATCGAGCGCATCATGGCCAAGACGTCCGAGCCCCGAGCGCCTTTCGA
GCCCCGGCCTGCTGCGTTAGAGGCAGACAGCAGCCAGAGCAAGAAACTGCTCAACCTCTGCTCGCCGCTG
CCCTGTATGATCCCTCTCCAGCCTCTAGGCTACGAGGTGCCGTCCAAGACGCTGCTCAGTTACTCGGAGT
TCTGGAAGAGCAGCCTCCGGGCGGGCGGCGGTGGAGGAGGAGGCAGCGGCGGGGGGGCCCCAGTGTGCGG
CGCCAGCGGCTTGTGCAAAACCAACTGTGGCGTGTGCTGCAAGGCCGAACTGGGCCTCGCGCCTTCTGCG
CTGCCCGCCGGCAGGGTCATCAAACCGCAGGTCATCAACCAGGCTGTGGGGCTGCCTGCCAGCGGCTCTC
TCTACTACTTCAACTACCTGGACTCCACCGCTTACCCACCTTCGGAGCTCCTCGGAGGCCACCTTTTCCC
ATCCGGCCTCCTCAACGCACAGGCCCCCACTTCCCTGGCTGCTCACCCCAAGCTTTTTCTGCTGGAGAAC
GCCAAACTGGCCAGCCTGGCTGCGGACAAGTTCCCCCACCCAGCTTCCTATCCCCATAAGGAGCGCTTGC
ATGCGCCACTGGAGCAGGTGCTGAAGGAGAACTCGGCCTTGACAGCTGAACGAGGGGGAGTCAAGAGCCA
CAGCAAACTACCGGGGGGCTCTACTGACAGCAAACCCAAAAACTTCACCTGCGAAGTGTGCGGCAAGGTG
TTCAATGCTCACTATAACCTCACCCGCCACATGCCTGTCCACACCGGAGCTAGACCGTTTGTGTGCAAAG
TCTGTGGCAAAGGCTTCCGCCAGGCCAGCACTCTCTGCAGACACAAAATTATCCATACCCAGGAAAAACC
ACATAAGTGTAACCAGTGCGGCAAAGCCTTCAATCGCAGCTCCACGCTCAACACGCACATCCGCATCCAC
GCGGGCTACAAGCCCTTCGTCTGCGAGTTTTGTGGCAAAGGCTTTCACCAAAAAGGGAACTACAAGAATC
ACAAGCTCACCCACAGCGGCGAGAAGCAGTACAAATGCACTATCTGTAACAAGGCCTTCCATCAGGTCTA
CAATCTGACCTTCCACATGCACACCCACAACGACAAGAAGCCTTTCACGTGTGCCACTTGCGGCAAAGGT
TTTTGCAGAAACTTTGACTTAAAGAAACATGTGCGCAAACTTCATGACAGCGTGGGTCCCACCGCCACCC
CCTCAGCAAAGGACCTAGCCAGGACAGTTCAGAGCTGA

Translation (455 aa):
MASSASLETMVPPACPRAGASPATSKTLAFSIERIMAKTSEPRAPFEPRPAALEADSSQSKKLLNLCSPL
PCMIPLQPLGYEVPSKTLLSYSEFWKSSLRAGGGGGGGSGGGAPVCGASGLCKTNCGVCCKAELGLAPSA
LPAGRVIKPQVINQAVGLPASGSLYYFNYLDSTAYPPSELLGGHLFPSGLLNAQAPTSLAAHPKLFLLEN
AKLASLAADKFPHPASYPHKERLHAPLEQVLKENSALTAERGGVKSHSKLPGGSTDSKPKNFTCEVCGKV
FNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTHIRIH
AGYKPFVCEFCGKGFHQKGNYKNHKLTHSGEKQYKCTICNKAFHQVYNLTFHMHTHNDKKPFTCATCGKG
FCRNFDLKKHVRKLHDSVGPTATPSAKDLARTVQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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