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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS26467.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
26467.1 |
Reviewed, update pending |
Mus musculus |
13 |
Tfap2a |
23 |
108 |
98 |
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Public Note for CCDS 26467.1 |
The coding region has been updated to start at an upstream in-frame start codon that is supported by conservation data. |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by CCDS collaboration) Sequence IDs included in CCDS 26467.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000110193.8 |
ENSMUSP00000105822.2 |
Accepted |
alive |
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NCBI |
NM_001301674.1 |
NP_001288603.1 |
Updated |
not alive |
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NCBI |
NM_001301674.2 |
NP_001288603.2 |
Pending |
alive |
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NCBI |
NM_011547.4 |
NP_035677.2 |
Updated |
not alive |
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NCBI |
NM_011547.5 |
NP_035677.3 |
Pending |
alive |
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Chromosomal Locations for CCDS 26467.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1314 nt): ATGCTTTGGAAACTGACGGATAATATCAAGTACGAAGACTGCGAGGACCGTCACGACGGCACCAGCAACG GGACGGCACGGTTGCCCCAGCTGGGCACTGTAGGTCAATCTCCCTACACCAGCGCCCCGCCGCTGTCCCA CACCCCTAATGCCGACTTCCAGCCTCCCTACTTCCCCCCGCCCTACCAGCCTATCTACCCCCAGTCGCAA GATCCTTACTCCCACGTCAACGACCCCTACAGCCTGAATCCTCTGCACGCCCAGCCGCAGCCGCAGCACC CGGGCTGGCCCGGTCAGAGGCAGAGCCAGGAATCTGGGCTCTTACACACACACCGGGGCTTACCCCACCA ACTGTCGGGCCTGGACCCTCGCAGGGACTATCGGCGGCACGAGGACCTCTTGCACGGCCCGCACGGGCTC GGCTCTGGGCTCGGGGACCTCCCGATCCACTCCTTACCTCACGCCATCGAGGACGTCCCGCACGTAGAAG ACCCGGGTATTAACATCCCAGATCAAACTGTAATTAAGAAAGGCCCCGTGTCCCTGTCCAAGTCCAACAG CAATGCTGTCTCCGCCATCCCTATTAACAAGGACAACCTCTTCGGTGGCGTGGTAAACCCCAACGAAGTC TTCTGTTCAGTTCCGGGTCGCCTGTCGCTCCTCAGCTCCACCTCGAAGTACAAGGTCACGGTGGCGGAAG TACAGCGGCGCCTCTCACCGCCCGAGTGTCTTAACGCGTCGCTCCTGGGCGGAGTACTGCGGAGAGCGAA GTCTAAGAATGGAGGGAGATCTTTAAGAGAAAAACTGGACAAGATAGGATTGAATCTGCCAGCAGGGAGA CGTAAAGCTGCCAACGTTACCCTCCTCACGTCACTAGTGGAAGGAGAAGCCGTCCACCTAGCCAGGGACT TTGGGTACGTGTGCGAAACTGAATTTCCTGCCAAAGCAGTAGCAGAATTTCTCAACCGACAACATTCCGA TCCCAATGAGCAAGTGGCAAGAAAAAACATGCTCCTGGCCACAAAACAGATCTGCAAAGAGTTCACTGAC CTGCTGGCTCAGGACCGATCTCCCCTGGGGAACTCGCGGCCCAATCCTATCCTGGAGCCTGGCATCCAGA GTTGCTTGACCCACTTCAACCTCATCTCCCATGGCTTCGGCAGCCCGGCGGTGTGTGCAGCGGTTACGGC CCTGCAGAACTATCTCACCGAGGCCCTCAAGGCCATGGACAAAATGTACCTCAGCAACAACCCCAACAGC CACACGGACAACAGCGCCAAAAGCAGTGACAAAGAAGAGAAACACAGAAAGTGA
Translation (437 aa): MLWKLTDNIKYEDCEDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQ DPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHGL GSGLGDLPIHSLPHAIEDVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEV FCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGR RKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVARKNMLLATKQICKEFTD LLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNS HTDNSAKSSDKEEKHRK
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