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Report for CCDS25066.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
25066.1 |
Public |
Mus musculus |
11 |
Abr |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 25066.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000072740.12 |
ENSMUSP00000072522.6 |
Accepted |
alive |
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NCBI |
NM_198895.2 |
NP_942598.1 |
Updated |
not alive |
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NCBI |
NM_198895.3 |
NP_942598.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_942598.1 |
859 |
Q5SSL4-1 |
859 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 25066.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2580 nt): ATGGAGCCGCTTAGCCACCGGGGCCTGCCGCGCCTCTCTTGGATCGACACCCTCTACAGCAACTTCAGCT ACGGTGCGGAGGACTACGACGCAGAGGGGCATGAGGAGCAGAAGGGGCCCCCCGAGGGCTCGGAGACCAT GCCGTACATCGACGAGTCACCCACCATGTCGCCCCAGCTCAGCGCCCGCAGCCAAGGTGGTGGGGACAGC GTCTCGCCCACCCCACCTGAGGGATTGGCACCTGGGGTGGAGGCAGGGAAGGGTCTGGAGATGAGGAAGC TAGTCCTCTCTGGGTTTCTGGCCAGTGAAGAGATCTACATTAACCAGCTGGAAGCTCTGTTACTGCCCAT GAAACCCCTGAAGGCCACAGCCACCACCTCCCAGCCTGTGCTCACCATCCAACAGATTGAGACCATCTTC TACAAGATCCAGGACATCTACGAGATCCACAAGGAGTTCTACGACAACCTCTGCCCCAAGGTGCAGCAGT GGGACAGCCAGGTCACCATGGGCCATCTTTTCCAGAAACTGGCCAGCCAGCTTGGCGTGTACAAAGCATT TGTGGATAACTATAAAGTCGCTCTGGAGACAGCCGAGAAGTGCAGCCAGTCCAACAACCAGTTCCAGAAG ATCTCTGAGGAACTCAAAGTGAAAGGGCCCAAGGACTCTAAGGACAGCCATACATCAGTCACCATGGAAG CTCTGCTGTACAAGCCAATTGACCGAGTCACCCGGAGCACCCTGGTCCTTCACGATCTGTTGAAGCACAC ACCCGTGGACCACCCGGACTACCCGCTGCTTCAGGATGCTCTCCGCATCTCCCAGAATTTCCTGTCTAGC ATTAACGAGGACATTGATCCTCGCCGGACTGCAGTCACAACCCCCAAGGGAGAGACTCGGCAGCTGGTGA AGGACGGCTTCCTGGTGGAAATGTCTGAGAGCTCCCGGAAGCTGCGGCATGTCTTTCTCTTCACAGATGT TCTGCTGTGTGCCAAGCTAAAGAAGACCTCAGCAGGAAAGCATCAGCAGTATGACTGTAAGTGGTACATC CCTCTGGCTGACTTAGTGTTCCCATCCCCTGAGGAGTCAGAGGCCAGTCCCCAGGTGCACCCCTTCCCAG ACCACGAGCTCGAGGACATGAAAACGAAGATCTCTGCCCTCAAGAGTGAGATCCAGAAGGAGAAAGCCAA CAAAGGACAGAGCCGAGCCATTGAGCGCCTCAAAAAGAAGATGTTTGAGAATGAGTTCTTACTGCTGCTC AATTCCCCAACGATCCCTTTCCGGATACACAATCGGAATGGAAAGAGTTACCTGTTTCTTCTGTCTTCTG ACTATGAGAGGTCGGAGTGGAGAGAAGCGATTCAGAAGCTACAGAAGAAGGATCTCCAGGCCTTTGTCCT GAGCTCTGTGGAGCTCCAGGTGCTCACGGGATCCTGTTTCAAGCTTAGGACTGTGCACAACATTCCTGTC ACCAGCAATAAAGATGATGATGAGTCTCCAGGACTGTACGGCTTCCTTCATGTCATCGTCCACTCTGCCA AGGGCTTTAAACAGTCAGCCAATCTTTACTGTACTCTGGAGGTGGATTCCTTTGGCTATTTTGTCAGCAA AGCCAAGACCAGGGTGTTTCGGGACACGACAGAGCCCAAGTGGGATGAGGAGTTTGAGATTGAGCTGGAG GGTTCACAGTCCCTGAGGATCCTGTGTTATGAGAAGTGCTACGACAAGACCAAGGTCAACAAAGACAACA ATGAGATTGTGGACAAGATCATGGGCAAGGGGCAGATCCAGCTGGATCCACAGACAGTAGAAAGCAAGAA CTGGCATACGGACGTGATTGAAATGAATGGGATCAAAGTGGAATTCTCCATGAAATTTACCAGCCGTGAC ATGAGCCTGAAGAGGACCCCATCCAAAAAGCAGACAGGCGTCTTTGGAGTGAAGATCAGCGTGGTGACCA AGCGGGAGCGCTCCAAGGTGCCCTACATCGTCCGGCAATGCATAGAAGAGGTGGAGAAGAGGGGCATTGA GGAGGTTGGCATCTACAGGATATCAGGGGTGGCCACGGACATCCAGGCCCTGAAGGCTGTCTTTGATGCC AATAACAAGGACATCCTACTGATGCTGAGCGACATGGACATCAACGCCATCGCTGGGACCCTCAAGCTAT ACTTTCGGGAGCTGCCTGAGCCCCTCCTTACAGATAGACTTTATCCAGCCTTCATGGAGGGCATTGCCCT GTCAGACCCTGCTGCCAAGGAGAACTGCATGATGCACCTACTCCGCTCCCTGCCTGACCCCAACCTCATC ACCTTCCTTTTCCTGCTGGAACACTTGAAAAGGGTTGCTGAGAAGGAGCCCATCAACAAGATGTCACTTC ACAACCTTGCCACGGTGTTTGGCCCCACGTTACTGAGACCATCAGAAGTGGAGAGCAAAGCACATCTCAC ATCAGCTGCAGACATCTGGTCCCATGATGTCATGGCCCAGGTCCAGGTCCTCCTCTACTACCTGCAGCAT CCCCCCATTTCCTTCGCAGAACTGAAGCGGAACACACTGTACTTCTCCACAGACGTGTAG
Translation (859 aa): MEPLSHRGLPRLSWIDTLYSNFSYGAEDYDAEGHEEQKGPPEGSETMPYIDESPTMSPQLSARSQGGGDS VSPTPPEGLAPGVEAGKGLEMRKLVLSGFLASEEIYINQLEALLLPMKPLKATATTSQPVLTIQQIETIF YKIQDIYEIHKEFYDNLCPKVQQWDSQVTMGHLFQKLASQLGVYKAFVDNYKVALETAEKCSQSNNQFQK ISEELKVKGPKDSKDSHTSVTMEALLYKPIDRVTRSTLVLHDLLKHTPVDHPDYPLLQDALRISQNFLSS INEDIDPRRTAVTTPKGETRQLVKDGFLVEMSESSRKLRHVFLFTDVLLCAKLKKTSAGKHQQYDCKWYI PLADLVFPSPEESEASPQVHPFPDHELEDMKTKISALKSEIQKEKANKGQSRAIERLKKKMFENEFLLLL NSPTIPFRIHNRNGKSYLFLLSSDYERSEWREAIQKLQKKDLQAFVLSSVELQVLTGSCFKLRTVHNIPV TSNKDDDESPGLYGFLHVIVHSAKGFKQSANLYCTLEVDSFGYFVSKAKTRVFRDTTEPKWDEEFEIELE GSQSLRILCYEKCYDKTKVNKDNNEIVDKIMGKGQIQLDPQTVESKNWHTDVIEMNGIKVEFSMKFTSRD MSLKRTPSKKQTGVFGVKISVVTKRERSKVPYIVRQCIEEVEKRGIEEVGIYRISGVATDIQALKAVFDA NNKDILLMLSDMDINAIAGTLKLYFRELPEPLLTDRLYPAFMEGIALSDPAAKENCMMHLLRSLPDPNLI TFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLLRPSEVESKAHLTSAADIWSHDVMAQVQVLLYYLQH PPISFAELKRNTLYFSTDV
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