CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS24582.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
24582.1 |
Public |
Mus musculus |
11 |
Timd2 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:171284](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:24582.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:171284](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 11 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 24582.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000055102.12 |
ENSMUSP00000060891.6 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000055102.12](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000060891.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000055102](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000060891](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000109225.8 |
ENSMUSP00000104848.2 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000109225.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000104848.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000109225](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000104848](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000169584.7 |
ENSMUSP00000131540.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000169584.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000131540.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000169584](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000131540](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001161355.1 |
NP_001154827.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001161355.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001154827.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001161355](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001154827](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001154827.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001161356.1 |
NP_001154828.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001161356.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001154828.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001161356](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001154828](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001154828.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_134249.5 |
NP_599010.4 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_134249.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_599010.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_134249](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_599010](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_599010.4](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 24582.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (918 nt): ATGAATCAGATTCAAGTCTTCATTTCAGGCCTCATACTGCTTCTCCCAGGTGCCGTGGAGTCTCATACAG CAGTGCAGGGGCTGGCGGGTCACCCTGTCACACTTCCATGTATTTATTCGACACACCTTGGTGGAATCGT TCCTATGTGTTGGGGCCTAGGGGAATGCCGCCATTCTTATTGTATACGGTCACTTATCTGGACCAATGGA TATACGGTCACACATCAGAGGAACAGTCGATACCAGCTAAAGGGGAATATTTCAGAAGGAAATGTGTCCT TGACCATAGAGAACACTGTTGTGGGTGATGGTGGTCCCTATTGCTGTGTAGTGGAGATACCTGGAGCGTT CCATTTTGTGGACTATATGTTGGAAGTTAAACCAGAAATTTCCACGAGTCCACCAACAAGGCCCACAGCT ACAGGAAGACCCACAACTATTTCAACAAGATCCACACATGTACCAACATCAACCAGAGTCTCTACCTCTA CTTCTCCAACACCAGCACACACAGAGACCTACAAACCAGAGGCCACTACATTTTATCCAGATCAGACTAC AGCTGAGGTGACAGAAACCTTACCCTCTACTCCTGCAGACTGGCATAACACTGTGACATCCTCAGATGAC CCTTGGGATGATAACACTGAAGTAATCCCTCCACAGAAGCCACAGAAAAACCTGAATAAGGGCTTCTATG TTGGCATCTCCATTGCAGCCCTGCTGATATTGATGCTTCTGAGCACCATGGTTATCACCAGGTACGTGGT TATGAAAAGGAAGTCAGAATCTCTGAGCTTCGTTGCCTTCCCTATCTCTAAGATTGGAGCTTCCCCCAAA AAAGTGGTCGAACGGACCAGATGTGAAGACCAGGTCTACATTATTGAAGACACTCCTTACCCCGAAGAAG AGTCCTAG
Translation (305 aa): MNQIQVFISGLILLLPGAVESHTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNG YTVTHQRNSRYQLKGNISEGNVSLTIENTVVGDGGPYCCVVEIPGAFHFVDYMLEVKPEISTSPPTRPTA TGRPTTISTRSTHVPTSTRVSTSTSPTPAHTETYKPEATTFYPDQTTAEVTETLPSTPADWHNTVTSSDD PWDDNTEVIPPQKPQKNLNKGFYVGISIAALLILMLLSTMVITRYVVMKRKSESLSFVAFPISKIGASPK KVVERTRCEDQVYIIEDTPYPEEES
|