NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS24276.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24276.1 Public Mus musculus 10 Nabp2 23 108 98 CCDS HistoryNCBI Gene:69917Re-query CCDS DB by CCDS ID:24276.1Re-query CCDS DB by GeneID:69917See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24276.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026439.13 ENSMUSP00000026439.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026439.13Link to Ensembl Protein Viewer:ENSMUSP00000026439.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000026439Re-query CCDS DB by Protein ID:ENSMUSP00000026439
Original member Current member EBI ENSMUST00000164199.7 ENSMUSP00000128634.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164199.7Link to Ensembl Protein Viewer:ENSMUSP00000128634.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164199Re-query CCDS DB by Protein ID:ENSMUSP00000128634
Original member Current member NCBI NM_001358972.1 NP_001345901.1 Accepted alive Link to Nucleotide Sequence:NM_001358972.1Link to Protein Sequence:NP_001345901.1Re-query CCDS DB by Nucleotide ID:NM_001358972Re-query CCDS DB by Protein ID:NP_001345901Link to BLAST:NP_001345901.1
Original member Current member NCBI NM_027257.2 NP_081533.1 Accepted alive Link to Nucleotide Sequence:NM_027257.2Link to Protein Sequence:NP_081533.1Re-query CCDS DB by Nucleotide ID:NM_027257Re-query CCDS DB by Protein ID:NP_081533Link to BLAST:NP_081533.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001345901.1 212 Q8R2Y9 212 100% 0 0
NP_081533.1 212 Q8R2Y9 212 100% 0 0

Chromosomal Locations for CCDS 24276.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128401724 128401923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128408154 128408220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128408316 128408397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128408535 128408606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128408698 128408836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128409247 128409325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (639 nt):
ATGACGACCGAGACCTTCGTGAAGGATATCAAGCCCGGGCTCAAGAATCTGAATCTTATCTTCATTGTAC
TG
GAGACAGGCCGGGTGACCAAGACAAAGGACGGACACGAGGTTCGGACCTGTAAAGTGGCAGACAAAAC
G
GGCAGCATCAACATCTCAGTATGGGACGATGTGGGCAACCTGATCCAACCTGGGGACATTATCCGACTC
ACC
AAAGGGTATGCTTCAGTGTTCAAAGGTTGTCTGACACTGTACACTGGCCGTGGGGGCGATCTGCAGA
AG
ATTGGAGAATTCTGTATGGTTTATTCCGAAGTCCCTAATTTCAGTGAGCCCAATCCAGAGTATAACAC
G
CAGCAGGCGCCCAACAAATCGGTGCAGAACAATGACAACAGCCCTACTGCCCCACAAGCGACCACGGGA
CCC
CCTGCTGCCTCTCCAGCTTCCGAGAACCAGAACGGAAATGGACTGAGCACCCAGCTAGGTCCTGTGG
GT
GGCCCCCATCCTTCTCACACCCCCTCACATCCCCCCAGCACCCGAATCACTCGAAGTCAACCCAACCA
C
ACGCCTTCCGGCCCTCCTGGCCCCTCCAGCAACCCTGTCAGCAACGGCAAAGAAACCCGAAGAAGCAGC
AAG
AGATAG


Translation (212 aa):
MTTETFVKDIKPGLKNLNLIFIVLETGRVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLIQPGDIIRL
T
K
GYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYNTQQAPNKSVQNNDNSPTAPQATTG
P
PAASP
ASENQNGNGLSTQLGPVGGPHPSHTPSHPPSTRITRSQPNHTPSGPPGPSSNPVSNGKETRRSS
K
R




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser