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Report for CCDS23297.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23297.2 Public Mus musculus 9 Zfp609 23 108 98 CCDS HistoryNCBI Gene:214812Re-query CCDS DB by CCDS ID:23297.2Re-query CCDS DB by GeneID:214812See the combined annotation on chromosome 9 in Sequence Viewer

Public Note for CCDS 23297.1
The coding region has been updated to extend the N-terminus to one that is more supported by available conservation data and mouse transcripts.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 23297.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000159109.1 ENSMUSP00000124089.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000159109.1Link to Ensembl Protein Viewer:ENSMUSP00000124089.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000159109Re-query CCDS DB by Protein ID:ENSMUSP00000124089
Original member Current member NCBI NM_172536.3 NP_766124.2 Accepted alive Link to Nucleotide Sequence:NM_172536.3Link to Protein Sequence:NP_766124.2Re-query CCDS DB by Nucleotide ID:NM_172536Re-query CCDS DB by Protein ID:NP_766124Link to BLAST:NP_766124.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766124.2 1413 Q8BZ47-1 1413 100% 0 0

Chromosomal Locations for CCDS 23297.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 65696148 65696221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65697032 65697248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65697494 65697669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65700822 65701188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65702272 65704618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65706091 65706178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65730976 65731201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 65794622 65795368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4242 nt):
ATGTCCTTGAGCAGTGGAGCCTGCGGAGGGAAAGGAGTGGATGCAAACCCGGTTGAGACATACGACAGTG
GGGATGAATGGGACATTGGAGTAGGGAACCTCATCATCGACCTGGACGCCGATCTGGAAAAGGACCAGCA
GAAACTGGAAATGTCAGGCTCCAAGGAGGTGGGGATACCAGCCCCCAATGCTGTGGCCACACTACCAGAC
AACATCAAGTTTGTCACCCCAGTGCCAGGTCCTCAAGGGAAGGAAGGCAAATCAAAATCCAAAAGGAGTA
AGAGTGGCAAAGACGCTAGCAAGCCCACTCCAGGGACTTCCTTGTTCTCTCCAAGTGAGGGAGCAGCCAG
CAAGAAAGAGGTGCAGGGTCGCGCAGGAGATGGTGCCAGTGCGGGAGGCCTGGTTGCTGCTGTTGCTCCC
AAGGGCTCAGAGAAGGCTGCTAAGGCGTCACGCAGTGTAGCTGGCTCCAAAAAGGAAAAGGAGAACAGCT
CATCTAAGGGCAAGAAGGAGAGAAGTGAAGGCGTGGGGACTTGTTCGGAAAAGGATCCTGGGGTCCTCCA
GCCAGTTCCCTTGGGAGGACGGGGTAGTCAGTATGATGGAAGTGCAGGGATGGACACAGGAACCGTGGAG
CCGCTTGGGAGTATAGCTATTGAACCTGGGGCAGCGCTCAATCCTTTGGGAACTAAGCCGGAGCCAGAGG
AAGGGGAGAATGAGTGCCGGCCACTAAAGAAAGTCAAGTCTGAAAAGATGGAGTCCCCAGTCTCCACCCC
AGCGGTGCTGCCACTGCACCTGTTAGTGCCAGTGGTCAATAATGACATCTCATCTCCCTGTGAGCAGATC
ATGGTCCGTACCCGATCAGTTGGTGTCAACACATGCGACGTGGCTCTAGCCACAGAGCCTGAGTGCTTAG
GCCCCTGTGAGCCTGGAACCAGCGTCAACCTTGAAGGCATCGTGTGGCAGGAAACAGAAGATGGGATGTT
GGTGGTAAATGTGACATGGAGAAACAAGACATATGTAGGTACACTTCTTGACTGCACAAGGCATGATTGG
GCACCCCCAAGGTTCTGTGACTCCCCCACCAGTGACTTGGAAATGCGGAACGGCCGAGGAAGAGGCAAGC
GCATGCGTCCCAGCAGTAACACACCTGTCAGTGAGGCAGCCGCAGCCTCTGACAGCAAAGGGACCAGCAG
CAGCAGCAAGACCCGAGCAGGAGCCAATAGCAAAGGCCGTCGGGGTAGCCAGAACTCCTCAGAGCACCGC
CCTCCTGCTAGCAGCACCTCTGAGGATGTCAAAGCCAGCCCTTCCTCAGCCAATAAGCGGAAAAGCAAAC
CTCTTTCAGACATGGAGCTGAATTCTAGCTCAGAGGACTCCAAAGGGAGCAAGCGTGTCCGTACAAATTC
CATGGGCTCAGCCACCGGGCCCCTCCCTGGGACCAAGGTAGAACCCACTCTTGTGGACAGAAATTGTCCC
TCCCCGGTCCTGATTGACTGTCCCCACCCAAACTGCAACAAAAAGTACAAGCACATCAATGGGCTTAAGT
ACCACCAAGCTCACGCCCACACGGATGACGACAGCAAACCGGAAGCTGATGGAGACAGTGAGTATGGAGA
AGAGCCCGCCCTCCATGCAGACCTCAGCTGCAACGGTGCACCTGTCCCACAGAAAGGATCCTTGTCCCCT
GCCCGCTCAGCTACCCCCAAAGTTCGGCTTGTTGAGCCTCACAGCCCTTCCCCTTCGAGCAAATTCAGCA
CAAAAGGCCTCTGTAAGAAAAAACTGAGTGGGGAGGGAGACACAGACCCTGGAGCCTTATCCAATGATGG
CTCTGATGACGGGCCCTCGGTAATGGATGAAACAAGCAATGATGCCTTTGACTCTTTGGAAAGGAAGTGT
ATGGAAAAGGAAAAGTGTAAAAAGCCCTCCAGTCTGAAATCTGAAAAGATTCCATCCAAGAGCTTAAAAT
CAGCCCGCCCCATTGCCCCTGCCATCCCCCCACAACAGATCTACACTTTCCAGACAGCCACCTTCACAGC
AGCAAGCCCAGGTTCCTCCTCAGGCTTGACCACCACCGTGGTCCAAGCAATGCCCAACAGTCCCCAACTC
AAGCCCATTCAGCCCAAGCCCACTGTTATGGGAGAGCCTTTCACAGTCAACCCTGCCCTGACCCCTGCCA
AGGACAAGAAAAAGAAAGACAAAAAAAAGAAGGACTCATCAAAGGAACTTGAAAGTCCTCTGACCCCTGG
GAAGGTATGCCGAGCAGAAGAAGGTAAGAGCCCGTTCAGAGACGCAGCAGGAGATGGAATCAAAGTGGAG
AGCCTTCTGAACGGCTCCTCAGAGTCCCACCAAAGCCGGTTAGCTAGTATCAAGGCTGAGGCTGATAAGA
TTTACAGTTTCACTGACAATGCCCCCAGCCCTTCAATTGGAGGCAGCAGCCGCCTAGATAGTACTACCCC
GACCCAACCCCTAACTCCCCTCCACGTAGTGACCCAGAATGGAGCCGAAGCCAGCTCAGTCAAAACCAAT
AGCCCTGCCTACTCTGACATCTCTGATGCTGGGGAGGATGGGGAGGGCAAGGTGGACAGTGCCAAGTCGA
AGGACCCCGAGCAGCTGGTTAAAGAAGGGGCTAAGAAAACACTGTTCCCCCCTCAGCCACAGAGCAAAGA
CTCCCCATATTATCAAGGCTTTGAAAGTTACTACTCTCCAGGTTATGCACAGTCCAGCCCAGGGACTCTC
ACCTCAAGCAGCCAGGCAGGAATGGAGGGCCAGCCCCTAAAGACAAAAAAGGATGAGGAGCCTGAGAGCG
TAGAAGGGAAAGTAAAGAATGATGTCTGTGAGGAAAAGAAGCCGGAGCTGAGCAATTCCAGTCAGCAGCC
CTCCGTCATCCAGCAGCGGCCCAACATGTACATGCAGTCCCTGTACTACAACCAGTATGCCTACGTGCCT
CCTTATGGCTACAGTGACCAGAGTTACCACAGCCACCTCCTGAGTACCAACACCGCTTATCGGCAGCAGT
ATGAAGAACAGCAGAAGCGGCAGAGCCTGGAGCAGCAGCAGCAGCAGCAGCGGGGACTGGACAAGAAGAC
AGAGATGGGCCTGAAAGAGCGGGAGGCATCGCTCAAGGAAGAGTGGAAGCAAAAGCCCTCAATTCCACCA
ACTCTCACCAAGGCTCCCAGCCTGACAGACCTGGTGAAGTCAGGGCCCGGCAAGGCCAAGGAGCCTGGGA
CAGATCCTGCCAAGTCTGTCATCATTCCCAAGTTAGATGACTCATCAAAACTCCCCAGCCAGCCCCCTGA
AGGCCTTAAAGGGAAGCTGGGTGAGGCCAGCCACCTAGGCAAGGAGGCGTCTGAGGCTAAGACGGGCACT
GAGTGTGGCCGACAGGCAGAGGTGGATCCAATACTCTGGTACCGACAGGAGACGGAGTCTCGAATGTGGA
CATATGTTTATCCTGCCAAATACTCAGACATCAAGTCAGAGGATGATCGGTGGAAAGAGGAACGGGACCG
AAAATTAAAGGAGGACAGGAGCCGGAGTAAGGACTCTGTTCCCAAGGAAGACGGGAAGGAAAGCACAAGT
AGTGACTGCAAGCTACCCCCATCTGAGGAATCCCGCCTCGGGAGCAAGGAGCCCCGACCAAGTGTCCATG
TGCCTGTGTCCTCCCCGCTCACCCAGCACCAGTCCTACATCCCCTACATGCATGGCTACTCTTACAGCCA
GTCATATGACCCCAACCACCCCAGCTACCGGGGGATGCCTGCTGTGATGATGCAGAACTACCCAGGTTCC
TATTTGCCTTCCAGCTATTCTTTCTCCCCGTATGGCAGCAAGGTCTCAGGTGGCGAGGACGCTGACAAGG
CCCGTGCCAGCCCCAGTGTGAGCTGTAAAGCCAGCTCAGAGTCCAAAGCCCTGGACATCTTGCAGCAACA
TGCCAGTCACTACAAGAGCAAGTCTCCCACGATAAGTGATAAAAATTCTCAGGAGAGAGATCGAGGAGGC
TGTGGGGTGGTTGGGGGTGGTGGCAGCTGTGGCAGTGTTGCGGGAGCAGGAGGTACTGACAGGAGTGCCG
ACCGGCCCCGCACATCCCCTTCCCAGCGCCTGATGTCCACACACCACCACCACCACCACTTGGGCTATTC
CTTGCTCCCAGCACAGTACAACCTACCCTATGCCGCAGGGCTTTCTTCTACAGCCATTGTTGCCAGCCAG
CAAGGCTCAACTCCCTCACTCTACCCACCCCCCCGGAGGTGA

Translation (1413 aa):
MSLSSGACGGKGVDANPVETYDSGDEWDIGVGNLIIDLDADLEKDQQKLEMSGSKEVGIPAPNAVATLPD
NIKFVTPVPGPQGKEGKSKSKRSKSGKDASKPTPGTSLFSPSEGAASKKEVQGRAGDGASAGGLVAAVAP
KGSEKAAKASRSVAGSKKEKENSSSKGKKERSEGVGTCSEKDPGVLQPVPLGGRGSQYDGSAGMDTGTVE
PLGSIAIEPGAALNPLGTKPEPEEGENECRPLKKVKSEKMESPVSTPAVLPLHLLVPVVNNDISSPCEQI
MVRTRSVGVNTCDVALATEPECLGPCEPGTSVNLEGIVWQETEDGMLVVNVTWRNKTYVGTLLDCTRHDW
APPRFCDSPTSDLEMRNGRGRGKRMRPSSNTPVSEAAAASDSKGTSSSSKTRAGANSKGRRGSQNSSEHR
PPASSTSEDVKASPSSANKRKSKPLSDMELNSSSEDSKGSKRVRTNSMGSATGPLPGTKVEPTLVDRNCP
SPVLIDCPHPNCNKKYKHINGLKYHQAHAHTDDDSKPEADGDSEYGEEPALHADLSCNGAPVPQKGSLSP
ARSATPKVRLVEPHSPSPSSKFSTKGLCKKKLSGEGDTDPGALSNDGSDDGPSVMDETSNDAFDSLERKC
MEKEKCKKPSSLKSEKIPSKSLKSARPIAPAIPPQQIYTFQTATFTAASPGSSSGLTTTVVQAMPNSPQL
KPIQPKPTVMGEPFTVNPALTPAKDKKKKDKKKKDSSKELESPLTPGKVCRAEEGKSPFRDAAGDGIKVE
SLLNGSSESHQSRLASIKAEADKIYSFTDNAPSPSIGGSSRLDSTTPTQPLTPLHVVTQNGAEASSVKTN
SPAYSDISDAGEDGEGKVDSAKSKDPEQLVKEGAKKTLFPPQPQSKDSPYYQGFESYYSPGYAQSSPGTL
TSSSQAGMEGQPLKTKKDEEPESVEGKVKNDVCEEKKPELSNSSQQPSVIQQRPNMYMQSLYYNQYAYVP
PYGYSDQSYHSHLLSTNTAYRQQYEEQQKRQSLEQQQQQQRGLDKKTEMGLKEREASLKEEWKQKPSIPP
TLTKAPSLTDLVKSGPGKAKEPGTDPAKSVIIPKLDDSSKLPSQPPEGLKGKLGEASHLGKEASEAKTGT
ECGRQAEVDPILWYRQETESRMWTYVYPAKYSDIKSEDDRWKEERDRKLKEDRSRSKDSVPKEDGKESTS
SDCKLPPSEESRLGSKEPRPSVHVPVSSPLTQHQSYIPYMHGYSYSQSYDPNHPSYRGMPAVMMQNYPGS
YLPSSYSFSPYGSKVSGGEDADKARASPSVSCKASSESKALDILQQHASHYKSKSPTISDKNSQERDRGG
CGVVGGGGSCGSVAGAGGTDRSADRPRTSPSQRLMSTHHHHHHLGYSLLPAQYNLPYAAGLSSTAIVASQ
QGSTPSLYPPPRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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