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Report for CCDS22715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22715.1 Public Mus musculus 8 Zdhhc7 23 108 98 CCDS HistoryNCBI Gene:102193Re-query CCDS DB by CCDS ID:22715.1Re-query CCDS DB by GeneID:102193See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22715.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034280.8 ENSMUSP00000034280.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034280.8Link to Ensembl Protein Viewer:ENSMUSP00000034280.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000034280Re-query CCDS DB by Protein ID:ENSMUSP00000034280
Original member Current member NCBI NM_133967.3 NP_598728.1 Accepted alive Link to Nucleotide Sequence:NM_133967.3Link to Protein Sequence:NP_598728.1Re-query CCDS DB by Nucleotide ID:NM_133967Re-query CCDS DB by Protein ID:NP_598728Link to BLAST:NP_598728.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598728.1 308 Q91WU6 308 100% 0 0

Chromosomal Locations for CCDS 22715.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 120082540 120082716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120083230 120083360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120084844 120084925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120085345 120085441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120086629 120086753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 120087754 120088068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGCAGCCGTCGGGACACAGGCTCCGGGACATCGAGCACCATCCTCTCCTGACTGACAATGACAATTACG
ACTCAGCATCCTCTTCGTCCTCCGAGACTGACATGGCAGACAGGGTGTGGTTCATCCGAGATGGCTGTGG
CATGGTCTGTGCTGTCATGACGTGGCTTCTCGTCGTCTATGCAGACTTCGTGGTGACCTTTGTCATGCTG
CTGCCTTCCAAAGACTTCTGGTACTCCGTGGTGAACGGAGTCCTCTTCAACTGCTTGGCGGTGCTCGCGC
TGTCCTCCCACCTGAGAACCATGCTCACTGACCCGGGTGCTGTCCCCAAAGGCAACGCCACGAAGGAGTA
CATGGAGAGCTTGCAGCTGAAGCCAGGCGAGGTGATCTACAAGTGCCCCAAGTGTTGCTGCATCAAGCCG
GAACGTGCCCACCACTGCAGTATTTGCAAGAGATGCATTCGAAAGATGGACCATCACTGCCCGTGGGTGA
ACAACTGCGTCGGGGAGAAGAATCAGAGGTTCTTCGTGCTTTTCACCATGTACATAGCTCTGTCTTCGGT
TCATGCTCTGATTCTCTGTGGGCTTCAGTTCATCTCCTGCGTCCGAGGGCAGTGGACAGAGTGCAGCGAC
TTCTCTCCTCCCATAACTGTAATCCTGTTGGTCTTCCTGTGCCTTGAGGGCCTCCTGTTCTTCACCTTCA
CCGCAGTCATGTTCGGCACCCAGATCCACTCGATATGCAATGATGAAACAGAGATCGAGAGGCTGAAGAG
CGAGAAGCCCACGTGGGAGCGCAGGCTGCGGTGGGAAGGAATGAAGTCTGTCTTCGGGGGCCCTCCCTCC
CTCCTCTGGATGAACCCCTTCGTTGGCTTCCGACTCAGGCGGCTGCAGATGAGGACCAGGAAAGGAGGCC
CCGAGTTCTCTGTCTGA

Translation (308 aa):
MQPSGHRLRDIEHHPLLTDNDNYDSASSSSSETDMADRVWFIRDGCGMVCAVMTWLLVVYADFVVTFVML
LPSKDFWYSVVNGVLFNCLAVLALSSHLRTMLTDPGAVPKGNATKEYMESLQLKPGEVIYKCPKCCCIKP
ERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALILCGLQFISCVRGQWTECSD
FSPPITVILLVFLCLEGLLFFTFTAVMFGTQIHSICNDETEIERLKSEKPTWERRLRWEGMKSVFGGPPS
LLWMNPFVGFRLRRLQMRTRKGGPEFSV


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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