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Report for CCDS22663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22663.1 Public Mus musculus 8 Vac14 23 108 98 CCDS HistoryNCBI Gene:234729Re-query CCDS DB by CCDS ID:22663.1Re-query CCDS DB by GeneID:234729See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22663.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034190.10 ENSMUSP00000034190.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034190.10Link to Ensembl Protein Viewer:ENSMUSP00000034190.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000034190Re-query CCDS DB by Protein ID:ENSMUSP00000034190
Original member Current member NCBI NM_146216.3 NP_666328.2 Accepted alive Link to Nucleotide Sequence:NM_146216.3Link to Protein Sequence:NP_666328.2Re-query CCDS DB by Nucleotide ID:NM_146216Re-query CCDS DB by Protein ID:NP_666328Link to BLAST:NP_666328.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666328.2 782 Q80WQ2 782 100% 0 0

Chromosomal Locations for CCDS 22663.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 110618890 110618993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110632030 110632180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110632449 110632616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110633453 110633515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110634286 110634393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110635072 110635181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110635377 110635483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110636335 110636469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110636881 110637033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110645758 110645818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110653232 110653376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110653612 110653677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110671026 110671182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110682492 110682624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110710318 110710492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110711593 110711711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110712748 110712827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110715427 110715577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 110719807 110719969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2349 nt):
ATGAACCCAGAGAAGGATTTTGCGCCGCTCACTCCCAACATCGTAAGGGCCCTGAATGATAAACTCTACG
AAAAGCGGAAGGTTGCAGCGCTGGAGATCGAGAAGCTGGTGCGGGACTTTGTGGCCCAGAACAACACCAT
GCAAATCAAGCACGTGATCCAGACCCTGTCTCAGGAGTTTGCCCTGTCCCAGCACCCCCACAGCCGGAAA
GGGGGCCTCATCGGTCTGGCAGCCTGCTCTATTGCCCTAGGCAAGGACTCAGGGCTCTACCTGAAGGAGC
TGATAGAGCCAGTGCTGACCTGCTTTAATGACGCAGACAGCAGGCTGCGCTACTACGCTTGTGAGGCCCT
CTACAATATCGTCAAAGTGGCCCGAGGTGCCGTGCTGCCGCACTTCAATGTTCTCTTCGATGGACTGAGT
AAGTTGGCTGCTGACCCAGACCCCAATGTGAAAAGTGGATCTGAGCTCCTGGACCGCCTCTTAAAGGACA
TTGTGACAGAAAGCAGCAAGTTTGACCTGGTGAGCTTCATCCCCCTTTTGCGGGAGAGGATTTACTCCAA
CAACCAATACGCCCGACAGTTCATCATCTCCTGGATCCTGGTTCTGGTGTCGGTGCCAGACATTAACCTG
CTGGATTACCTGCCAGAGATCCTAGATGGGCTCTTCCAGATCCTGGGTGACAATGGCAAGGAGATTCGGA
AAATGTGTGAGGTGGTTCTTGGAGAGTTCTTGAAAGAAATTAAGAAGAACCCATCCAGTGTGAAGTTTGC
TGAGATGGCCAACATCCTGGTGATCCACTGCCAGACCACAGATGACCTGATTCAGCTGACGGCTATGTGC
TGGATGCGGGAATTCATCCAGCTGGCGGGCCGGGTAATGCTGCCCTATTCCTCTGGGATCCTGACTGCTG
TCCTGCCATGCTTGGCCTATGATGACCGCAAGAAAAGTATCAAGGAGGTGGCCAATGTGTGTAACCAGAG
CTTGATGAAGCTGGTCACCCCTGAGGATGATGAACCCGATGAGCCAAAGTCAGTAGCACAGAAGCAGACC
GAACCCAACCCTGAGGATTCCCTGCCAAAGCAGGAGGGGACAGCCAGTGGAGGTCCAGGTTCCTGTGACT
CCAGCTTTGGAAGTGGCATCAATGTCTTCACCTCAGCCAACACTGATAGGGCTCCAGTGACCCTGCACCT
GGACGGGATTGTTCAAGTCCTGAACTGTCACCTTAGTGACACAACCATTGGGATGATGACCAGGATTGCT
GTTCTGAAGTGGCTCTACCATCTCTACATCAAAACTCCTCGAAAGATGTTCCGGCACACAGACAGCCTCT
TCCCCATCTTACTTCAGACATTATCTGACGAATCTGATGAGGTTGTCTTGAAGGATCTGGAAGTGTTGGC
AGAAATTGCTTCCTCCCCTGCAGGCCAGACGGATGACCCAGGTGCACCTGATGGCCCTGACCTCCGAGTC
AACCACTCGGAGCTTCAGGTGCCCACCTCCGGCAGAGCCAACCTACTAAACCCTCCCAGTACCAAAGGCT
TAGAAGGCTCCCCCTCCACTCCCACCATGAACTCCTACTTTTACAAGTTCATGATCAACCTTCTACAGAC
GTTCAGCAGTGAACGGAAGCTCCTGGAGGCCAGAGGCCCGTTCATCATCAGGCAGCTCTGCCTCCTGCTG
AATGCAGAGAACATCTTCCATTCAATGGCAGACATCCTGCTTCGGGAGGAGGACCTCAAGTTCGCGTCCA
CCATGGTGCACACCCTCAACACCATCCTGCTCACCTCCACCGAGCTCTTCCAGCTGAGGAACCAGCTCAA
GGACCTGCAGACCCCGGAAAGCCAGAACCTCTTCTGCTGCCTGTACCGCTCCTGGTGCCACAACCCAGTC
ACCACCGTGTCCCTCTGCTTCCTCACCCAGAACTACCGCCACGCCTATGACCTCATCCAGAAGTTTGGGG
ACCTGGAAGTCACAGTGGATTTCCTCACAGAGGTGGACAAACTCGTGCAGCTAATTGAGTGCCCCATCTT
TACATATCTACGCCTGCAACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCCTG
CTCATGCTGTTGCCCCAGAGCAGTGCCTTCCAGCTGCTCTCTCACCGGCTCCAGTGTGTGCCCAACCCTG
AGCTGCTGCAGACTGAAGACTGTCTGAAAGCGGCCCCCAAGTCCCAGAAAGGTGACTCCCCCAGCATCGA
CTACACAGAGCTGCTGCAGCACTTTGAAAAAGTCCAGAAACAGCACCTGGAAGTAAGACACCAGCGCAGT
GGGCGAGGGGATCACCTGGACCGCAGAGTTATCCTCTGA

Translation (782 aa):
MNPEKDFAPLTPNIVRALNDKLYEKRKVAALEIEKLVRDFVAQNNTMQIKHVIQTLSQEFALSQHPHSRK
GGLIGLAACSIALGKDSGLYLKELIEPVLTCFNDADSRLRYYACEALYNIVKVARGAVLPHFNVLFDGLS
KLAADPDPNVKSGSELLDRLLKDIVTESSKFDLVSFIPLLRERIYSNNQYARQFIISWILVLVSVPDINL
LDYLPEILDGLFQILGDNGKEIRKMCEVVLGEFLKEIKKNPSSVKFAEMANILVIHCQTTDDLIQLTAMC
WMREFIQLAGRVMLPYSSGILTAVLPCLAYDDRKKSIKEVANVCNQSLMKLVTPEDDEPDEPKSVAQKQT
EPNPEDSLPKQEGTASGGPGSCDSSFGSGINVFTSANTDRAPVTLHLDGIVQVLNCHLSDTTIGMMTRIA
VLKWLYHLYIKTPRKMFRHTDSLFPILLQTLSDESDEVVLKDLEVLAEIASSPAGQTDDPGAPDGPDLRV
NHSELQVPTSGRANLLNPPSTKGLEGSPSTPTMNSYFYKFMINLLQTFSSERKLLEARGPFIIRQLCLLL
NAENIFHSMADILLREEDLKFASTMVHTLNTILLTSTELFQLRNQLKDLQTPESQNLFCCLYRSWCHNPV
TTVSLCFLTQNYRHAYDLIQKFGDLEVTVDFLTEVDKLVQLIECPIFTYLRLQLLDVKNNPYLIKALYGL
LMLLPQSSAFQLLSHRLQCVPNPELLQTEDCLKAAPKSQKGDSPSIDYTELLQHFEKVQKQHLEVRHQRS
GRGDHLDRRVIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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