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Report for CCDS22662.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22662.1 Public Mus musculus 8 Cmtr2 23 108 98 CCDS HistoryNCBI Gene:234728Re-query CCDS DB by CCDS ID:22662.1Re-query CCDS DB by GeneID:234728See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22662.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056972.5 ENSMUSP00000060558.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056972.5Link to Ensembl Protein Viewer:ENSMUSP00000060558.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000056972Re-query CCDS DB by Protein ID:ENSMUSP00000060558
Original member Current member NCBI NM_146215.4 NP_666327.2 Accepted alive Link to Nucleotide Sequence:NM_146215.4Link to Protein Sequence:NP_666327.2Re-query CCDS DB by Nucleotide ID:NM_146215Re-query CCDS DB by Protein ID:NP_666327Link to BLAST:NP_666327.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666327.2 767 Q8BWQ4 767 100% 0 0

Chromosomal Locations for CCDS 22662.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 110221060 110223363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2304 nt):
ATGAGCAAGCGCAGAAAGCTTCCGGCTCGGCAGCCAGCTTGCTTGGAGACCTTCAGCCCAGACGTCCTCA
ATGACGTGTCTGAGCTCTTTGCCAAGAGCTTTTCCTACCGTAAGCCACTCGATAATGAGTGGCAGTTACC
AGCTCCCACGGAGAGCTTCTCCTGTGGGCACCTCGAGTTCAGGGCTCTTCTAGACTTGAAGAACTCCCTG
AACGAAGTGAAGAACCTCCTGAGCGATAAGAAGCTGGACGAGTGGCACAGGCACACGGCCTTCACCAACA
AGGCAGGCAAAATCATCTCTCATGTCAAAAAGGCCGTGAACGCGGAACTCTGCACTCAGGCCTGGTGCAA
ATTCCAGGAGATCCTGTGCAGTTTCCCCCTCATTCCGCAGGAAGCTTTTCAGAGTGGAAGACTGAATTCT
CTGCACCTGTGTGAAGCTCCGGGCGCCTTCATCGCTAGCCTCAACCATTACTTAAAATCTCACCGGTTCC
CCTGTGAATGGAGCTGGGTGGCGAACAGCCTGAATCCATACCACGAGGCAAACGACAATCTTAGGATGAT
TACGGATGACCGGCTGATGGCAAATACCTTGCACTGCTGGTACTTCGGCCCAGATAATACCGGTGATATC
ATGACCCTGAAATATCTGACCGGGCTTCAGGACTTCCTCAGCGGCATGTCTCCCATTCACTTGGTCACGG
CTGATGGCAGCTTCGATTGCCAAGGAAACCCAGGTGAACAGGAAGCCTTAGTGTCGTCTTTGCATTACTG
CGAAGCTGTCACTGCTCTGATCACTCTTGGAGACGGCGGCTCTTTTGTTCTAAAGATGTTTACGTTGTTT
GAACACTGTTCTGTGAACCTCATGTACCTGCTAAATTGTTCTTTTGACCAAGTTCATGTTTTCAAACCTG
CGACTAGCAAGGCAGGAAACTCAGAAGTCTATGTGGTGTGTCTTCGCTATAAGGGAAGAGAGGCCGTTCA
GCCTCTGCTATCTAGGATGGTGTTGAACTTCGGCACTGAGATGACCAGGAAGGCGCTCTTTCCTCATCAT
GTGATCCCCAAATCCTTCCTTGAGCGACACGAAGAGTGTTGTACGTTCTTTCATAGATACCAGTTAGAGA
CTATATCTGAGAACATTCGTCTTTTTGAGAGCATGGGAACGGGGGAGCAAGAGAGACTCAATAATCTAAG
GGATTGCGCTGTACAATATTTTATGCAAAAATTTCAACTGAAGCCTCTTTCAAGAAATCACTGGCTCGTT
AAAAAGTCCAATATTGGTTGTAGTATGAACACGAAATGGTTTGGACAGAGAAACAAGTATTTTAAAACCT
ATAATGAACGGAAGATGATGGAAACCCTTTCATGGAAGGATAAAGTAGCCAAAGGATACTTCAATAGTTG
GGCAGAGGAACACACCGTCTATCATCCCGGGCAGAATTCCCTCCTTGAAGGGACTGCTTCCAGTCTTGAG
TACCAGTCGTGGCAAGTCTTAGAAGGAAAGAAACTGCCGAAGGTAAAGTGTTCCCCTTTCTGTGATGGTG
AAATTTTAAAGACTCTCAATGAAGCCATCGAGAAGTCCTTAGGAGAAGCTTTGAGCGTGGATGCCAAGGT
CAGTTCCAAGCAGCAATACCGCTGTTGTCCCGTCTTTTCAGAAGAGTCAGTATTATCCGAGTTGTTGAGG
CTTACCAAGTGCCTTCCGGACGAACAGGGTGCGGAACCCAGCGGCCCAGTCAAGTGCCTGCTGGTGGGCT
CACCGGCCGTCTGTGATCTCCAGATGCCCGCGCCACTGGAAATCCAGCTTGTGGAGTCCGTGGAGCTCAC
AGCCTTCAGCTGTTCCCTGCTTCACGATGGTGACCCAGCCTACCAGCATTTGTTCTTGGACTGCCTGCTG
CACTCACTGAGGCGGCTTCACAGGGGAGATGTGATGGTCTTGCCCATCCTTTCTTGCTTCACGAGGTTTA
TGGCTGGCCTGACCTTCGTCCTCCACGGCTGTTTTAGATTTATCACGTTCTCTTGTCCCACGTCCCTGGA
GCCCCTCAGGACCTGTGCCGTCTTGCTGTGCATTGGTTATCAGAACCTTCCAGATGCAGTTTTCCAGTTT
CTACAGAATGTTCATGACCTCTTGAGCAAGCTGCTGCACCCCAGTGCCCCTCGGCAGATTTTACAGTTCC
TACCAATGGAGGCGCTCCTTCAGGGGACGCTGCTTGACTTTTTGTGGGATTTGAACGCTGCCATTGCTAA
AAGGCATCTGCATTTGATTATTCAAGGAGAGCGAGACCAAGCCATCGGCAGCCTTGAGTTATAA

Translation (767 aa):
MSKRRKLPARQPACLETFSPDVLNDVSELFAKSFSYRKPLDNEWQLPAPTESFSCGHLEFRALLDLKNSL
NEVKNLLSDKKLDEWHRHTAFTNKAGKIISHVKKAVNAELCTQAWCKFQEILCSFPLIPQEAFQSGRLNS
LHLCEAPGAFIASLNHYLKSHRFPCEWSWVANSLNPYHEANDNLRMITDDRLMANTLHCWYFGPDNTGDI
MTLKYLTGLQDFLSGMSPIHLVTADGSFDCQGNPGEQEALVSSLHYCEAVTALITLGDGGSFVLKMFTLF
EHCSVNLMYLLNCSFDQVHVFKPATSKAGNSEVYVVCLRYKGREAVQPLLSRMVLNFGTEMTRKALFPHH
VIPKSFLERHEECCTFFHRYQLETISENIRLFESMGTGEQERLNNLRDCAVQYFMQKFQLKPLSRNHWLV
KKSNIGCSMNTKWFGQRNKYFKTYNERKMMETLSWKDKVAKGYFNSWAEEHTVYHPGQNSLLEGTASSLE
YQSWQVLEGKKLPKVKCSPFCDGEILKTLNEAIEKSLGEALSVDAKVSSKQQYRCCPVFSEESVLSELLR
LTKCLPDEQGAEPSGPVKCLLVGSPAVCDLQMPAPLEIQLVESVELTAFSCSLLHDGDPAYQHLFLDCLL
HSLRRLHRGDVMVLPILSCFTRFMAGLTFVLHGCFRFITFSCPTSLEPLRTCAVLLCIGYQNLPDAVFQF
LQNVHDLLSKLLHPSAPRQILQFLPMEALLQGTLLDFLWDLNAAIAKRHLHLIIQGERDQAIGSLEL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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