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Report for CCDS21096.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21096.1 Public Mus musculus 7 Proser3 23 108 98 CCDS HistoryNCBI Gene:333193Re-query CCDS DB by CCDS ID:21096.1Re-query CCDS DB by GeneID:333193See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21096.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062708.6 ENSMUSP00000059135.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062708.6Link to Ensembl Protein Viewer:ENSMUSP00000059135.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000062708Re-query CCDS DB by Protein ID:ENSMUSP00000059135
Original member Current member EBI ENSMUST00000108165.7 ENSMUSP00000103800.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108165.7Link to Ensembl Protein Viewer:ENSMUSP00000103800.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108165Re-query CCDS DB by Protein ID:ENSMUSP00000103800
Original member Current member NCBI NM_183321.1 NP_899144.1 Accepted alive Link to Nucleotide Sequence:NM_183321.1Link to Protein Sequence:NP_899144.1Re-query CCDS DB by Nucleotide ID:NM_183321Re-query CCDS DB by Protein ID:NP_899144Link to BLAST:NP_899144.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_899144.1 634 Q7TSA6-1 634 100% 0 0

Chromosomal Locations for CCDS 21096.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 30539515 30539578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30539749 30539830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30539919 30540837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30540921 30541096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30543487 30543614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30543691 30543773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30546125 30546225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30546303 30546427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30549041 30549208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30549607 30549665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1905 nt):
ATGTTCCCCAAGGTGGACAACCCTTTGGGCCATCAAGAAACCAGAACTGGAGCCACAAGGTCTCAAAGGC
CACAAGCTCCCAAGGCCACAGCAGCCAGTTCCGATGAGCTGTCTGAGGAGTCCTGGCCATCTAGTTCATG
GACCCCTTCCCCAGCCAGTACCACTGAGGGACAAAGTACCTCTCCACCCTGCAACTTAATTGACAACGAG
GACTCAATAGTAGCCAAGTACATAAACAGGTTCCGCCAAGCTCAGCCCACGAGCAGAGAGGACCGCCAGC
CTGCAGGCCCGACCTCAGCTGACTTTTGGTGGCTACAGCCTACAGCAGACTCGAGTGGTCACCTTGCAGC
AGGAGCTGGTGAACCTACAGGAAGATCTGCTGTGACAGGTCCATCTCCCACTGGTGTGTCCAGTACATCT
CTGGCTTCTGCGCCTCTTCAGAAAGTAAAGCAGAGTCTGAACTCATGGAACTCGTCTCTGCTGGACTTGG
AGACCCTAAGCCTACAAAGCCGAGCTGCCAGGCTGCTCAAGCGCAGCAAGGCCTCCCTCAACGATGCCAG
CAGCTCCTCCTTCCCCATCAGCTCCGATGGCCTCTCTCCCAGCTCTGTGACCTTCAATCCGGACTCCAAC
AAGAGTTCTAATCCCAAAGAACCTGTGCTGGGAGCCCCGGGGCCATCCCAGGCCATCCCTGCACCCCGCC
CAGCCTCGTCCCAGGCAACACTTAAGCCTGAGGATGACATTTTATACCAATGGCGGCAGCGGAGGAAGCT
TGAACAGTCTCTCCAGGGCGCAGGTGATGGAACCTGGGTGTTGCCTCGGATGCCGGCCCTCACCACGCAG
ACTCCTCCTGTCTCTGCCGTGAATCTTGGTTCCCAGGACACCCAGCCTAACTGCACTGCACCATGTGGCA
GTGTGGCCCAGCCTCCTCCCTCACAGGCCTTCTATATGGAGAGGCCACCTCTTTCAGGGCCCTCTCCACA
CATCTGGGCCCCCGGAACCCACGGGGTTCTCTGGGCCCCACAGGCCAATCCTTGGGTATCTTTTGGGATG
CTTCCTACCACACTGCTAACCTCCACCCTTGCTCCCTTGGCTTCCTTTCCTGTACCACCTACCTCTACTT
CAACTACCCCAGCTCCCACCCCCACTCCCCAGGTCTGCATCCCAGGGCCCCCAACCTCCGCTCCACCCCC
CTGCGCTTCCACCCCCGCTTCCACCCTCCCACTACCTGACACCCCCCAGGGACCAGCCATCCCTGAGCTG
AGTAGCTCTATCCAGCCCAAGAAGGTGGGCCCCAAGCCAAGGAGGGTGAGCACTTCGTCTCACCAGAAGA
CTACGGTGCCAGACACTACAGCTTTTGAGGGTCCCTGTTCACAGCTCAGGGGGGCCCTGAGCCAGGTAGT
GACAGCTCGGCTGTTCCCGGACAGCCCGGAGGATACGCCTCCATCTGAGGCAGATTTCCGGAAAGTCCAG
GCCATCCCTTCTCAAGCCAAAGTTCTGCGACCTCCACCTGAGTCTCGGCGTGGGTCCAAGACAGAGTCCC
GCAAAAGTCAAGTCACCCTCCCAGCTGACGCTGGGGATCCACAGCCGGCTACAGCTCCAAAGGCATCCAC
TCTGTTAGAGGTCCAACCACGTGAATTCAAGATGTCTGCACCCAGGATGGGAGCAGGTGACCCCTTGACC
ATTGTCCCCCCTGCCTCAAGCCACGCCCCTTCCGAGGACTTGCTATCCCAGGCCACCAAACTTCTACAGG
CTGCGGAAGACTCGGACGGCAGCGAGTTTCAGGAAGATCCTGTGTTGCAGCTGCTAAGGGCTCAGAGGGC
AGAGCTCCGGCAGCAGAAAAGGTGGATGCCCAGTTATCTCTCCTCTTGGACCACACTAAAGACCCGGGAT
CTTCGTCTCCTCTAG

Translation (634 aa):
MFPKVDNPLGHQETRTGATRSQRPQAPKATAASSDELSEESWPSSSWTPSPASTTEGQSTSPPCNLIDNE
DSIVAKYINRFRQAQPTSREDRQPAGPTSADFWWLQPTADSSGHLAAGAGEPTGRSAVTGPSPTGVSSTS
LASAPLQKVKQSLNSWNSSLLDLETLSLQSRAARLLKRSKASLNDASSSSFPISSDGLSPSSVTFNPDSN
KSSNPKEPVLGAPGPSQAIPAPRPASSQATLKPEDDILYQWRQRRKLEQSLQGAGDGTWVLPRMPALTTQ
TPPVSAVNLGSQDTQPNCTAPCGSVAQPPPSQAFYMERPPLSGPSPHIWAPGTHGVLWAPQANPWVSFGM
LPTTLLTSTLAPLASFPVPPTSTSTTPAPTPTPQVCIPGPPTSAPPPCASTPASTLPLPDTPQGPAIPEL
SSSIQPKKVGPKPRRVSTSSHQKTTVPDTTAFEGPCSQLRGALSQVVTARLFPDSPEDTPPSEADFRKVQ
AIPSQAKVLRPPPESRRGSKTESRKSQVTLPADAGDPQPATAPKASTLLEVQPREFKMSAPRMGAGDPLT
IVPPASSHAPSEDLLSQATKLLQAAEDSDGSEFQEDPVLQLLRAQRAELRQQKRWMPSYLSSWTTLKTRD
LRLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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