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Report for CCDS21023.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21023.1 Public Mus musculus 7 Prx 23 108 98 CCDS HistoryNCBI Gene:19153Re-query CCDS DB by CCDS ID:21023.1Re-query CCDS DB by GeneID:19153See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21023.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098644.8 ENSMUSP00000096241.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098644.8Link to Ensembl Protein Viewer:ENSMUSP00000096241.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098644Re-query CCDS DB by Protein ID:ENSMUSP00000096241
Original member Current member EBI ENSMUST00000238936.1 ENSMUSP00000158878.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000238936.1Link to Ensembl Protein Viewer:ENSMUSP00000158878.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000238936Re-query CCDS DB by Protein ID:ENSMUSP00000158878
Original member Current member NCBI NM_198048.2 NP_932165.2 Accepted alive Link to Nucleotide Sequence:NM_198048.2Link to Protein Sequence:NP_932165.2Re-query CCDS DB by Nucleotide ID:NM_198048Re-query CCDS DB by Protein ID:NP_932165Link to BLAST:NP_932165.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932165.2 1391 O55103-1 1391 99.6405% 0 5

Chromosomal Locations for CCDS 21023.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 27504980 27505006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27507947 27508103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27515251 27515447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27516040 27519834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4176 nt):
ATGGAGGCCAGGAGCCGCAGCGCTGAGGAGCTGAGACGGGCGGAGTTGGTGGAGATTATCGTGGAGACCG
AGGCACAGACCGGGGTCAGCGGCTTCAACGTAGCAGGCGGCGGCAAAGAAGGAATCTTTGTCCGTGAGCT
GCGAGAGGACTCACCGGCAGCTAAGAGCCTCAGCTTGCAAGAAGGGGACCAGCTGCTGAGTGCCCGTGTG
TTCTTTGAGAACTTCAAATATGAGGATGCACTTCGCCTGCTGCAATGCGCAGAGCCCTACAAGGTCTCCT
TCTGCTTGAAGCGCACTGTGCCCACCGGGGATCTGGCACTGAGGCCCGGGACGGTGTCTGGATACGAGAT
GAAGGGCCCACGGGCCAAAGTGGCCAAGCTGAACATCCAGAGTCTGGCCCCTGTGAAGAAGAAGAAGATG
GTGACTGGGGCCCTGGGGACCCCTGCAGATTTGGCCCCTGTTGACGTCGAGTTCTCTTTTCCCAAGTTCT
CCCGACTGCGTCGGGGTCTCAAAGCCGAGGCTGTCAAGGGACCTGTCCCAGCTGCCCCAGCCCGTCGCCG
CCTCCAGCTGCCTCGGCTGCGTGTCCGAGAAGTAGCTGAAGAGGCCCAGGTAGCCCGAATGGCTGCTGCT
GCTCCTCCCCCAAGGAAGGCCAAGGCAGAAGCTGAGGCAGCCACAGGAGCTGGGTTCACAGCCCCTCAGT
TAGAGCTAGTTGGGCCTCGGCTGCCTAGTGCCGAGGTGGGTGTCCCTCAGGTCTCAGTTCCCAAGGGGAC
CCCATCAACAGAGGCAGCCAGCGGCTTTGCCCTTCACCTGCCAACCCTTGGGCTAGGTGCCCCAGCTGCA
CCGGCTGTGGAGCCCCCAGCCACGGGAATCCAGGTTCCACAAGTGGAACTCCCCACCCTGCCCTCTCTAC
CCACTCTTCCCACACTTCCATGCCTGGACACCCAGGAAGGAGCTGCAGTGGTAAAAGTCCCTACCCTGGA
TGTGGCAGCTCCGTCTATGGGGGTGGACCTGGCTTTGCCGGGTGCAGAGGTGGAGGCCCAGGGAGAGGTT
CCTGAAGTGGCCCTCAAGATGCCCCGGCTCAGTTTCCCCCGTTTTGGGATTCGGGGGAAGGAAGCCACTG
AAGCCAAAGTAGTCAAGGGCAGCCCTGAGGCCAAAGCAAAGGGTCCCAGACTTCGAATGCCCACCTTTGG
GCTTTCTCTCCTGGAACCCCGGCCCTCTGGCCCTGAAGCTGTTGCTGAGAGCAAGCTGAAGCTACCCACC
CTCAAGATGCCCTCTTTCGGCATTGGTGTGACTGGGCCTGAGGTCAAGGCACCCAAGGGGCCCGAAGTAA
AGCTCCCTAAGGTTCCTGAGGTCAAACTCCCGAAAGTGCCCGAGGCAGCCATTCCAGATGTGCAACTCCC
TGAGGTACAGCTGCCCAAAATGTCAGACATGAAACTTCCAAAGATCCCTGAGATGGTTGTACCCGACGTT
CGTCTTCCGGAAGTGCAGCTGCCCAAAGTCCCTGAGATGAAAGTCCCAGAGATGAAGCTCCCGAAGGTGC
CCGAGATGGCCGTGCCCGATGTACACCTTCCAGATGTACAGCTCCCGAAAGTCCCAGAGATGAAGCTCCC
GAAGGTGCCCGAGATGGCCGTGCCCGATGTACACCTTCCAGATGTACAGCTCCCGAAAGTTCCAGAGATG
AAGCTACCAGAGATGAAGCTCCCGAAGGTGCCGGAGATGGCCGTGCCGGATGTACGACTCCCGGAAGTTC
AGCTGCCCAAAGTGTCTGAGGTGAAGCTCCCAAAGATGCCTGAGATGGCCGTGCCTGATGTCCACCTCCC
GGAGCTACAACTTCCCAAAATGTCCGAGGTGAAGCTCCCAAAGATGCCCGAGATGGCCGTGCCCGATGTT
CGCCTCCCGGAAGTTCAGCTGCCCAAAGTGTCAGAGATGAAACTCCCTAAGATGCCAGAGATGACCATGC
CCGACATTCGCCTCCCAGAAGTTCAGTTGCCCAAAGTGCCTGACATTAAACTTCCTGAAATGAAGCTTCC
AGAAATAAAACTCCCCAAAGTGCCTGACATGGCAGTGCCTGATGTCCCCCTTCCAGAGCTGCAGCTGCCC
AAAGTGTCGGACATTCGGCTGCCTGAAATGCAAGTGTCACAGGTCCCAGAGGTGCAGCTTCCCAAGATGC
CAGAGATGAAGTTGTCCAAGGTTCCTGAGGTACAGAGGAAATCTGCAGGGGCGGAGCAGGCAAAAGGGAC
TGAATTTAGTTTCAAGTTGCCCAAGATGACCATGCCCAAGTTGGGGAAAGTGGGCAAGCCTGGGGAGGCA
AGTATTGAGGTTCCAGACAAACTCATGACACTTCCCTGTCTGCAGCCAGAGGTGGGCACTGAGGCATCCC
ATGTTGGTGTCCCTTCCCTCTCTCTCCCCTCTGTGGAGCTTGACTTGCCTGGGGCCCTGGGCCTGGAGGG
ACAAGTCCAAGAAGCTGTCCCAGGCAAAGTGGAGAAGCCAGAGGGCCCCAGGGTAGCAGTGGGTGTTGGA
GAGGTGGGCTTTCGTGTGCCCTCTGTGGAGATTGTCACTCCTCAGCTGCCCACAGTTGAAGTTGAGAAAG
AGCAGCTAGAGATGGTGGAGATGAAAGTCAAACCCTCTTCCAAGTTCTCTCTGCCCAAATTCGGACTTTC
AGGGCCCAAAGCTGTCAAGGGAGAGGTGGAGGGGCCTGGGCGAGCCACCAAGCTGAAGGTTTCCAAGTTT
ACCATCTCACTTCCCAAAGCTCGAGCAGGGACTGAGGCCGAAGCGAAGGGAGCTGGGGAAGCCGGGTTGC
TGCCAGCGCTGGATCTGTCCATCCCACAGCTCAGCCTGGATGCCCAGCTGCCCTCAGGCAAGGTGGAAGT
AGCTGATAGCAAGCCTAAATCGTCCAGATTTGCTCTGCCCAAGTTTGGGGTGAAAGGCCGGGACTCTGAG
GCTGATGTACTGGTGGCAGGGGAGGCTGAGCTTGAGGGAAAGGGTTGGGGCTGGGATGGGAAGGTGAAGA
TGCCCAAGCTGAAAATGCCATCTTTTGGGTTGTCCCGAGGAAAGGAAGCAGAAACTCAGGATGGACGTGT
CAGCCCCGGGGAAAAGCTGGAGGCCATAGCTGGGCAGCTTAAGATCCCTGCGGTGGAATTGGTCACACCG
GGAGCTCAGGAGACAGAGAAGGTCACCAGTGGAGTGAAGCCGTCAGGCCTCCAGGTGTCCACCACTGGGC
AGGTGGTTGCAGAGGGCCAGGAGAGTGTGCAGAGGGTGTCCACACTAGGTATCTCTTTGCCCCAGGTGGA
ATTGGCCAGCTTTGGGGAGGCAGGCCCTGAGATCGTAGCCCCTTCTGCAGAGGGCACAGCAGGCTCTAGG
GTCCAGGTGCCACAGGTGATGCTGGAGCTACCTGGAACCCAGGTGGCAGGGGGTGATCTGTTAGTGGGTG
AGGGCATCTTCAAGATGCCCACAGTGACAGTGCCCCAGCTAGAGCTGGATGTGGGGCTGGGCCATGAAGC
CCAGGCTGGTGAAGCAGCCAAGAGTGAGGGTGGGATAAAGTTGAAGTTGCCCACACTGGGGACCGGAAGC
AGAGGAGAGGGCGTTGAGCCCCAGGGCCCCGAGGCCCAGCGCACCTTCCACCTCTCATTGCCCGATGTGG
AACTCACGTCACCAGTGAGTAGCCACGCTGAGTACCAGGTAGTTGAGGGTGATGGGGATGGTGGGCACAA
ACTCAAGGTTCGGCTGCCCCTGTTTGGTCTGGCAAAGGCCAAGGAAGGGATAGAAGTTGGAGAAAAGGCT
AAGAGTCCAAAGCTCAGGCTACCCCGAGTGGGCTTCAGCCAGAGTGAGTCGGTCTCCGGAGAAGGCTCTC
CAAGTCCTGAGGAGGAGGAAGAAGGCAGTGGGGAAGGGGCTTCCAGTCGCCGGGGTAGGGTAAGGGTCCG
CCTGCCTCGGGTAGGCTTGGCTTCCCCTTCTAAAGTCTCTAAGGGACAGGAGGGTGATGCAACCTCCAAG
TCCCCAGTTGGGGAGAAGTCACCCAAATTCCGTTTTCCTAGGGTGTCCTTAAGCCCCAAGGCCCGGAGTG
GGAGTAGGGACCGGGAAGAAGGTGGATTCAGGGTCCGACTGCCCAGTGTGGGATTTTCAGAAACAGCAGT
TCCAGGTTCCACCAGGATTGAGGGAACCCAGGCTGCTGCCATCTGA

Translation (1391 aa):
MEARSRSAEELRRAELVEIIVETEAQTGVSGFNVAGGGKEGIFVRELREDSPAAKSLSLQEGDQLLSARV
FFENFKYEDALRLLQCAEPYKVSFCLKRTVPTGDLALRPGTVSGYEMKGPRAKVAKLNIQSLAPVKKKKM
VTGALGTPADLAPVDVEFSFPKFSRLRRGLKAEAVKGPVPAAPARRRLQLPRLRVREVAEEAQVARMAAA
APPPRKAKAEAEAATGAGFTAPQLELVGPRLPSAEVGVPQVSVPKGTPSTEAASGFALHLPTLGLGAPAA
PAVEPPATGIQVPQVELPTLPSLPTLPTLPCLDTQEGAAVVKVPTLDVAAPSMGVDLALPGAEVEAQGEV
PEVALKMPRLSFPRFGIRGKEATEAKVVKGSPEAKAKGPRLRMPTFGLSLLEPRPSGPEAVAESKLKLPT
LKMPSFGIGVTGPEVKAPKGPEVKLPKVPEVKLPKVPEAAIPDVQLPEVQLPKMSDMKLPKIPEMVVPDV
RLPEVQLPKVPEMKVPEMKLPKVPEMAVPDVHLPDVQLPKVPEMKLPKVPEMAVPDVHLPDVQLPKVPEM
KLPEMKLPKVPEMAVPDVRLPEVQLPKVSEVKLPKMPEMAVPDVHLPELQLPKMSEVKLPKMPEMAVPDV
RLPEVQLPKVSEMKLPKMPEMTMPDIRLPEVQLPKVPDIKLPEMKLPEIKLPKVPDMAVPDVPLPELQLP
KVSDIRLPEMQVSQVPEVQLPKMPEMKLSKVPEVQRKSAGAEQAKGTEFSFKLPKMTMPKLGKVGKPGEA
SIEVPDKLMTLPCLQPEVGTEASHVGVPSLSLPSVELDLPGALGLEGQVQEAVPGKVEKPEGPRVAVGVG
EVGFRVPSVEIVTPQLPTVEVEKEQLEMVEMKVKPSSKFSLPKFGLSGPKAVKGEVEGPGRATKLKVSKF
TISLPKARAGTEAEAKGAGEAGLLPALDLSIPQLSLDAQLPSGKVEVADSKPKSSRFALPKFGVKGRDSE
ADVLVAGEAELEGKGWGWDGKVKMPKLKMPSFGLSRGKEAETQDGRVSPGEKLEAIAGQLKIPAVELVTP
GAQETEKVTSGVKPSGLQVSTTGQVVAEGQESVQRVSTLGISLPQVELASFGEAGPEIVAPSAEGTAGSR
VQVPQVMLELPGTQVAGGDLLVGEGIFKMPTVTVPQLELDVGLGHEAQAGEAAKSEGGIKLKLPTLGTGS
RGEGVEPQGPEAQRTFHLSLPDVELTSPVSSHAEYQVVEGDGDGGHKLKVRLPLFGLAKAKEGIEVGEKA
KSPKLRLPRVGFSQSESVSGEGSPSPEEEEEGSGEGASSRRGRVRVRLPRVGLASPSKVSKGQEGDATSK
SPVGEKSPKFRFPRVSLSPKARSGSRDREEGGFRVRLPSVGFSETAVPGSTRIEGTQAAAI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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