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Report for CCDS20996.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20996.1 Public Mus musculus 7 Axl 23 108 98 CCDS HistoryNCBI Gene:26362Re-query CCDS DB by CCDS ID:20996.1Re-query CCDS DB by GeneID:26362See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20996.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000002677.10 ENSMUSP00000002677.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000002677.10Link to Ensembl Protein Viewer:ENSMUSP00000002677.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000002677Re-query CCDS DB by Protein ID:ENSMUSP00000002677
Original member Current member NCBI NM_009465.4 NP_033491.2 Accepted alive Link to Nucleotide Sequence:NM_009465.4Link to Protein Sequence:NP_033491.2Re-query CCDS DB by Nucleotide ID:NM_009465Re-query CCDS DB by Protein ID:NP_033491Link to BLAST:NP_033491.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033491.2 888 Q00993 888 100% 0 0

Chromosomal Locations for CCDS 20996.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 25758662 25759013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25760751 25760887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25761405 25761564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25763284 25763393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25763943 25764064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25764422 25764514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25766518 25766595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25766793 25766888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25770218 25770309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25770633 25770765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25773099 25773125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25773343 25773493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25774084 25774223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25774515 25774725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25778370 25778485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25778624 25778704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25785834 25786010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25786887 25786987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25787291 25787516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25788415 25788478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2667 nt):
ATGGGCAGGGTCCCGCTGGCCTGGTGGTTGGCGCTGTGCTGCTGGGGGTGTGCAGCCCATAAGGACACAC
AGACCGAGGCTGGCAGCCCGTTTGTGGGGAACCCAGGGAATATCACAGGTGCCAGAGGACTCACGGGGAC
ACTTCGGTGTGAGCTCCAGGTTCAGGGGGAACCCCCTGAGGTGGTGTGGCTTCGAGATGGACAGATCCTA
GAACTGGCTGATAACACCCAGACCCAGGTGCCTCTGGGCGAAGACTGGCAAGATGAATGGAAAGTTGTCA
GTCAGCTCAGAATCTCAGCCCTGCAACTTTCAGATGCAGGGGAGTACCAGTGTATGGTGCATCTAGAAGG
ACGGACCTTTGTGTCTCAGCCGGGCTTTGTAGGGCTGGAAGGTCTCCCGTACTTCCTGGAGGAGCCTGAG
GACAAAGCTGTGCCTGCCAACACCCCTTTCAACCTAAGCTGCCAGGCCCAGGGACCCCCGGAACCCGTGA
CCCTACTCTGGCTTCAAGATGCTGTCCCCCTGGCCCCAGTCACAGGACACAGCTCCCAGCACAGTCTGCA
AACTCCAGGCCTGAACAAGACATCTTCTTTCTCATGTGAAGCCCACAATGCCAAGGGAGTCACCACCTCC
CGCACAGCCACCATCACAGTGCTCCCCCAGAGGCCTCACCATCTCCACGTGGTTTCCAGACAACCTACGG
AGCTAGAGGTAGCTTGGACCCCTGGCCTGAGTGGCATCTACCCGCTCACCCACTGCAACCTGCAGGCCGT
GCTGTCAGACGATGGGGTGGGTATCTGGCTGGGAAAGTCAGATCCTCCTGAAGACCCCCTCACCTTGCAA
GTATCAGTGCCCCCCCACCAGCTTCGGCTGGAAAAGCTCCTTCCTCACACCCCGTATCACATCCGGATAT
CCTGCAGCAGCAGCCAGGGCCCCTCACCTTGGACCCACTGGCTTCCTGTGGAGACCACAGAGGGAGTGCC
CTTGGGTCCCCCTGAGAACGTTAGCGCCATGCGGAATGGGAGCCAGGTCCTCGTGCGTTGGCAGGAGCCA
AGGGTGCCCCTGCAAGGCACCCTGTTAGGGTACCGGCTGGCATATCGAGGCCAGGACACCCCCGAGGTAC
TTATGGATATAGGGCTAACTCGAGAGGTGACCTTGGAACTGCGGGGGGACAGGCCTGTGGCTAACCTGAC
TGTGTCTGTGACAGCCTATACCTCGGCTGGGGATGGGCCCTGGAGCCTTCCTGTGCCCCTAGAGCCCTGG
CGCCCAGGGCAAGGACAGCCACTCCACCATCTGGTGAGTGAACCCCCACCTCGCGCCTTCTCGTGGCCTT
GGTGGTATGTACTGCTGGGAGCACTTGTGGCTGCCGCCTGCGTCCTCATCTTGGCCCTGTTCCTTGTCCA
TCGGAGGAAGAAGGAGACTCGATATGGGGAGGTGTTTGAGCCAACCGTGGAAAGAGGTGAACTGGTAGTC
AGGTACCGTGTCCGAAAGTCCTACAGCCGGCGGACCACTGAAGCCACCTTGAACAGTCTGGGCATCAGTG
AAGAGCTGAAGGAGAAACTACGAGACGTCATGGTAGATCGGCATAAGGTGGCCTTGGGGAAGACCCTGGG
AGAAGGAGAATTTGGCGCTGTGATGGAAGGTCAGCTCAATCAGGATGACTCCATCCTCAAGGTCGCTGTG
AAGACCATGAAAATTGCCATCTGCACAAGATCAGAGCTGGAGGATTTCCTGAGTGAAGCTGTCTGCATGA
AGGAATTTGACCACCCCAACGTCATGAGGCTCATTGGCGTCTGTTTTCAGGGCTCTGACAGAGAGGGTTT
CCCAGAACCTGTGGTCATCTTGCCTTTCATGAAACACGGAGACCTACACAGTTTCCTCCTGTACTCCCGG
CTCGGGGACCAGCCAGTGTTCCTGCCCACTCAGATGCTAGTGAAGTTCATGGCCGACATTGCCAGTGGTA
TGGAGTACCTGAGTACCAAGAGATTCATACATCGGGACCTGGCTGCCAGGAACTGCATGCTGAATGAGAA
CATGTCCGTGTGTGTGGCAGACTTCGGGCTCTCCAAGAAGATCTACAACGGGGATTACTACCGCCAAGGG
CGCATTGCCAAGATGCCAGTCAAGTGGATTGCTATTGAGAGTCTGGCAGATCGGGTCTACACCAGCAAGA
GCGATGTGTGGTCCTTCGGTGTGACAATGTGGGAGATCGCCACCCGAGGCCAAACTCCCTATCCAGGGGT
GGAGAACAGTGAGATTTACGACTACCTGCGTCAAGGAAATCGGCTGAAACAGCCTGTGGACTGTCTGGAC
GGCCTGTATGCCCTGATGTCTCGGTGCTGGGAACTGAACCCTCGAGACCGGCCAAGTTTTGCGGAGCTCC
GGGAAGACTTGGAGAACACACTGAAGGCTCTGCCCCCTGCTCAGGAGCCAGATGAAATCCTCTATGTCAA
CATGGATGAGGGCGGAAGCCACCTTGAACCCCGTGGGGCTGCTGGAGGAGCTGACCCCCCAACCCAACCT
GATCCTAAGGATTCCTGTAGCTGTCTCACTGCAGCTGACGTCCACTCAGCTGGACGCTATGTCCTTTGTC
CTTCTACAGCCCCAGGACCCACTCTGTCTGCTGACAGAGGCTGCCCAGCACCTCCAGGGCAGGAGGACGG
AGCCTGA

Translation (888 aa):
MGRVPLAWWLALCCWGCAAHKDTQTEAGSPFVGNPGNITGARGLTGTLRCELQVQGEPPEVVWLRDGQIL
ELADNTQTQVPLGEDWQDEWKVVSQLRISALQLSDAGEYQCMVHLEGRTFVSQPGFVGLEGLPYFLEEPE
DKAVPANTPFNLSCQAQGPPEPVTLLWLQDAVPLAPVTGHSSQHSLQTPGLNKTSSFSCEAHNAKGVTTS
RTATITVLPQRPHHLHVVSRQPTELEVAWTPGLSGIYPLTHCNLQAVLSDDGVGIWLGKSDPPEDPLTLQ
VSVPPHQLRLEKLLPHTPYHIRISCSSSQGPSPWTHWLPVETTEGVPLGPPENVSAMRNGSQVLVRWQEP
RVPLQGTLLGYRLAYRGQDTPEVLMDIGLTREVTLELRGDRPVANLTVSVTAYTSAGDGPWSLPVPLEPW
RPGQGQPLHHLVSEPPPRAFSWPWWYVLLGALVAAACVLILALFLVHRRKKETRYGEVFEPTVERGELVV
RYRVRKSYSRRTTEATLNSLGISEELKEKLRDVMVDRHKVALGKTLGEGEFGAVMEGQLNQDDSILKVAV
KTMKIAICTRSELEDFLSEAVCMKEFDHPNVMRLIGVCFQGSDREGFPEPVVILPFMKHGDLHSFLLYSR
LGDQPVFLPTQMLVKFMADIASGMEYLSTKRFIHRDLAARNCMLNENMSVCVADFGLSKKIYNGDYYRQG
RIAKMPVKWIAIESLADRVYTSKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPVDCLD
GLYALMSRCWELNPRDRPSFAELREDLENTLKALPPAQEPDEILYVNMDEGGSHLEPRGAAGGADPPTQP
DPKDSCSCLTAADVHSAGRYVLCPSTAPGPTLSADRGCPAPPGQEDGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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