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Report for CCDS20333.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
20333.1 |
Public |
Mus musculus |
6 |
Gata2 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 20333.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000015197.8 |
ENSMUSP00000015197.7 |
Accepted |
alive |
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EBI |
ENSMUST00000170089.7 |
ENSMUSP00000128198.1 |
Accepted |
alive |
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NCBI |
NM_001355253.1 |
NP_001342182.1 |
Accepted |
alive |
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NCBI |
NM_008090.5 |
NP_032116.4 |
Accepted |
alive |
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Chromosomal Locations for CCDS 20333.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1443 nt): ATGGAGGTGGCGCCTGAGCAGCCTCGCTGGATGGCGCACCCCGCCGTATTGAATGCGCAGCACCCCGACT CGCACCATCCGGGCCTGGCGCATAACTACATGGAGCCAGCACAGCTGCTGCCTCCCGACGAGGTGGATGT CTTCTTCAACCATCTCGACTCGCAGGGCAACCCTTACTACGCCAACCCGGCCCACGCGCGCGCGCGCGTT TCCTACAGCCCGGCGCATGCCCGTCTCACCGGAGGCCAGATGTGCCGACCACACTTGTTGCACAGCCCAG GCTTGCCGTGGCTGGACGGGGGCAAAGCAGCTCTCTCTGCCGCCGCTGCCCATCACCACAGTCCCTGGAC CGTCAGCCCGTTCTCCAAGACCCCGCTGCACCCCTCAGCTGCTGGAGCACCCGGAGGGCCTCTGTCTGTT TACCCAGGGGCTGCGGGTGGGAGCGGGGGAGGCAGTGGGAGCTCCGTGGCCTCCCTCACCCCCACTGCAG CCCACTCGGGCTCCCATCTCTTCGGCTTCCCACCCACGCCACCCAAAGAAGTGTCTCCAGACCCCAGCAC AACAGGAGCTGCTTCCCCGGCCTCTTCTTCTGCAGGGGGTAGTGTAGCCCGGGGTGAGGACAAGGATGGC GTCAAGTACCAAGTGTCACTCTCCGAGAGCATGAAGATGGAAGGCGGCAGTCCCCTGCGCCCGGGCCTAG CTACCATGGGCACCCAGCCTGCAACACACCACCCGATACCCACCTATCCCTCCTATGTGCCCGCCGCAGC TCATGACTATGGCAGCAGTCTCTTCCATCCAGGAGGCTTCCTGGGTGGCCCCGCCTCCAGCTTCACCCCT AAGCAGAGAAGCAAGGCTCGCTCCTGCTCAGAAGGCCGGGAGTGTGTCAACTGTGGTGCCACAGCCACCC CTCTCTGGCGACGAGATGGCACGGGCCACTACCTGTGCAATGCCTGTGGGCTCTACCACAAGATGAATGG ACAGAACCGGCCGCTCATCAAGCCCAAGCGGAGGCTGTCTGCTGCCAGAAGAGCGGGCACCTGTTGTGCA AATTGTCAGACGACAACCACCACCTTATGGCGCCGGAACGCCAACGGGGACCCTGTGTGCAACGCCTGTG GCCTCTACTACAAGCTGCACAATGTTAACAGGCCACTGACCATGAAGAAGGAAGGGATCCAGACCCGGAA TCGGAAGATGTCCAGCAAATCCAAGAAGAGCAAGAAAGGGGCTGAATGTTTCGAGGAGCTCTCCAAGTGC ATGCAAGAGAAGTCACCGCCCTTCAGTGCGGCTGCCCTGGCTGGACACATGGCACCTGTGGGACACCTCC CACCTTTTAGTCACTCTGGACACATCCTACCCACGCCCACGCCTATCCACCCTTCCTCCAGTCTCTCTTT TGGCCACCCCCACCCGTCCAGCATGGTGACTGCCATGGGCTAG
Translation (480 aa): MEVAPEQPRWMAHPAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYYANPAHARARV SYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHSPWTVSPFSKTPLHPSAAGAPGGPLSV YPGAAGGSGGGSGSSVASLTPTAAHSGSHLFGFPPTPPKEVSPDPSTTGAASPASSSAGGSVARGEDKDG VKYQVSLSESMKMEGGSPLRPGLATMGTQPATHHPIPTYPSYVPAAAHDYGSSLFHPGGFLGGPASSFTP KQRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCA NCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSSKSKKSKKGAECFEELSKC MQEKSPPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSMVTAMG
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