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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS18187.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
18187.1 |
Public |
Mus musculus |
4 |
Abca1 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 18187.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000030010.3 |
ENSMUSP00000030010.3 |
Accepted |
alive |
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NCBI |
NM_013454.3 |
NP_038482.3 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_038482.3 |
2261 |
P41233 |
2261 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 18187.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6786 nt): ATGGCTTGTTGGCCTCAGTTAAGGCTGCTGCTGTGGAAGAATCTGACATTTCGAAGGAGACAAACATGTC AGCTGTTACTGGAAGTGGCCTGGCCTCTCTTTATCTTCCTGATCCTGATCTCTGTACGCCTGAGCTACCC ACCCTACGAACAACATGAGTGCCACTTTCCGAATAAAGCCATGCCGTCTGCAGGAACCCTCCCCTGGGTA CAGGGGATTATCTGTAATGCCAACAACCCCTGCTTCCGTTATCCAACTCCCGGCGAGGCTCCCGGTGTTG TTGGAAACTTTAACAAGTCCATCGTGTCTCGCCTGTTCTCAGACGCTCAGAGGCTTCTTCTGTACAGCCA AAGAGATACCAGCATTAAGGACATGCACAAGGTCCTGAGAATGTTACGGCAGATCAAGCATCCCAACTCA AATTTGAAGCTCCAGGATTTTCTGGTGGACAATGAAACATTCTCTGGATTCCTGCAGCACAATTTGTCCC TTCCAAGATCTACTGTGGACAGCCTGCTGCAGGCGAATGTTGGTCTCCAGAAGGTATTTTTGCAAGGCTA CCAATTACATTTGGCCAGTCTGTGTAACGGATCAAAATTAGAAGAAATTATTCAGCTTGGTGATGCGGAA GTTTCTGCCCTCTGTGGTCTACCGAGGAAGAAGCTCGATGCAGCCGAGAGAGTACTGCGCTACAACATGG ACATCCTGAAGCCAGTTGTGACAAAACTAAATTCCACATCTCATCTCCCGACCCAGCATCTGGCTGAAGC CACCACAGTGTTGCTTGACAGCTTGGGGGGCCTGGCCCAAGAGCTGTTCAGCACAAAGAGCTGGAGCGAC ATGCGGCAGGAGGTGATGTTTCTGACCAACGTGAACAGCTCCAGCTCCTCCACCCAGATCTACCAGGCAG TGTCCCGCATCGTGTGTGGTCACCCAGAGGGTGGGGGCCTGAAGATCAAGTCCCTCAACTGGTACGAGGA TAACAACTACAAAGCCCTCTTTGGAGGGAATAACACCGAGGAAGACGTGGACACCTTCTATGACAATTCT ACAACTCCTTATTGCAATGATTTGATGAAGAACTTGGAGTCTAGTCCTCTTTCTCGAATTATTTGGAAGG CACTCAAGCCACTGCTTGTTGGAAAGATTCTCTATACACCTGACACACCAGCTACAAGGCAGGTCATGGC TGAGGTGAACAAGACCTTTCAGGAGTTGGCTGTGTTCCATGACCTGGAGGGCATGTGGGAAGAACTCAGC CCCCAAATTTGGACCTTCATGGAGAACAGCCAAGAGATGGACCTTGTCCGGACGCTGTTAGACAGCAGAG GCAATGACCAGTTTTGGGAACAGAAGTTGGATGGATTAGATTGGACTGCCCAAGACATCATGGCGTTTCT GGCCAAGAACCCAGAAGATGTTCAGTCCCCAAATGGCTCTGTGTATACCTGGAGAGAAGCTTTCAATGAG ACCAACCAGGCAATCCAGACGATATCTCGATTCATGGAGTGTGTCAACCTGAACAAGCTGGAACCCATTC CGACAGAAGTCAGGCTCATCAACAAGTCCATGGAGCTGCTGGACGAGAGGAAGTTCTGGGCTGGCATCGT GTTCACAGGCATCACTCCAGATAGTGTGGAGCTGCCCCATCATGTAAAGTACAAGATCCGGATGGACATT GACAACGTGGAGAGAACTAATAAGATCAAGGATGGGTACTGGGACCCTGGTCCTCGGGCTGACCCTTTTG AAGATATGCGCTATGTCTGGGGCGGCTTCGCCTACTTGCAGGATGTGGTGGAACAGGCCATCATCAGAGT GCTGACGGGATCTGAGAAGAAAACGGGTGTCTACGTGCAACAGATGCCCTACCCCTGTTATGTTGATGAC ATTTTTCTGCGGGTCATGAGCCGGTCAATGCCCCTCTTCATGACTCTAGCCTGGATCTACTCTGTCGCTG TGATCATCAAGAGCATTGTGTATGAGAAGGAGGCTCGGCTGAAGGAGACCATGCGGATCATGGGTCTGGA CAATGGCATCCTCTGGTTTAGCTGGTTTGTTAGCAGCCTCATCCCTCTGCTTGTGAGCGCTGGCCTGCTG GTGGTCATCTTGAAGTTAGGAAACCTGCTGCCCTATAGTGACCCCAGCGTGGTGTTCGTCTTCCTGTCTG TGTTTGCCATGGTGACCATCCTACAGTGCTTCCTCATTAGCACGCTCTTCTCCCGTGCCAACCTGGCAGC AGCCTGTGGGGGCATCATCTACTTCACGCTGTACCTGCCCTATGTGCTGTGCGTAGCCTGGCAGGACTAT GTGGGCTTCTCCATCAAGATCTTTGCTAGCCTGCTGTCTCCTGTGGCTTTTGGATTCGGCTGTGAGTATT TCGCCCTTTTCGAGGAGCAAGGTATCGGGGTCCAATGGGACAATCTCTTTGAGAGCCCGGTGGAGGAGGA CGGCTTCAATCTCACCACTGCAGTGTCCATGATGCTCTTTGACACCTTTCTCTATGGCGTGATGACATGG TACATCGAAGCCGTCTTTCCAGGACAGTATGGAATTCCCAGGCCCTGGTATTTTCCTTGTACCAAGTCAT ACTGGTTTGGTGAGGAAATTGATGAGAAGAGCCACCCTGGTTCCAGCCAGAAGGGAGTGTCAGAAATCTG CATGGAAGAGGAACCCACTCATCTGAGGCTGGGGGTGTCCATTCAGAACCTGGTGAAGGTTTACCGAGAT GGCATGAAGGTTGCTGTGGATGGCTTGGCGCTCAACTTTTACGAAGGCCAGATTACCTCCTTCCTGGGCC ACAATGGAGCAGGGAAGACCACCACCATGTCAATACTGACTGGGCTGTTTCCCCCAACTTCTGGCACGGC CTACATCCTGGGGAAGGACATTCGCTCGGAGATGAGCTCCATCCGGCAGAACCTGGGAGTCTGTCCCCAG CATAATGTGCTGTTTGACATGCTGACTGTCGAAGAGCACATCTGGTTCTATGCGCGCCTAAAGGGGCTCT CAGAGAAGCACGTGAAAGCAGAGATGGAGCAGATGGCCCTGGATGTTGGCTTACCCCCGAGCAAGCTGAA AAGCAAAACGAGTCAGCTCTCAGGTGGGATGCAGAGAAAGCTGTCTGTGGCCTTGGCCTTCGTGGGTGGA TCCAAGGTTGTCATTCTGGACGAGCCCACAGCCGGGGTGGACCCGTACTCTCGCAGGGGAATATGGGAAC TCCTGCTAAAATACCGGCAAGGCCGCACCATTATTTTGTCTACACACCACATGGACGAAGCTGACATCCT TGGGGACAGAATTGCCATCATTTCCCATGGGAAGCTGTGTTGTGTGGGCTCCTCCCTGTTTTTGAAAAAC CAGTTGGGAACGGGTTACTATCTGACCCTGGTTAAGAAAGATGTGGAATCGTCCCTCAGTTCCTGCAGAA ACAGTAGCAGCACCGTGTCTTGTCTGAAAAAGGAGGACAGTGTTTCTCAGAGCAGTTCTGATGCTGGCCT GGGCAGCGACCATGAAAGTGACACGCTGACCATCGATGTCTCTGCTATCTCCAACCTCATCAGGAAGCAC GTGTCTGAAGCCCGGCTGGTGGAGGACATTGGGCACGAGCTGACCTATGTGCTGCCGTACGAAGCCGCGA AGGAGGGAGCCTTTGTGGAACTCTTCCATGAGATTGATGACCGGCTCTCAGACCTGGGCATCTCCAGTTA TGGCATCTCGGAGACCACCCTGGAAGAAATATTCCTCAAAGTGGCTGAAGAGAGCGGGGTGGATGCTGAG ACCTCAGATGGTACTTTGCCAGCAAGACGAAACAGACGGGCCTTCGGGGACAAGCAGAGCTGTCTGCACC CATTTACGGAAGATGATGCTGTTGATCCCAATGACTCTGACATAGACCCAGAATCCAGGGAGACCGACCT GCTCAGTGGGATGGACGGCAAAGGCTCCTACCAGCTGAAGGGCTGGAAACTCACCCAGCAACAGTTTGTG GCCCTTTTGTGGAAGAGGCTGCTGATTGCCAGACGGAGCCGGAAGGGTTTCTTTGCTCAGATTGTCCTGC CAGCTGTCTTTGTTTGCATTGCCCTGGTCTTCAGCCTGATTGTGCCACCCTTTGGCAAGTACCCCAGCCT GGAACTTCAGCCCTGGATGTATAATGAGCAGTATACATTTGTCAGTAATGATGCTCCCGAGGACATGGGC ACCCAGGAACTCCTGAATGCTCTGACCAAAGATCCAGGCTTTGGGACCCGCTGTATGGAAGGAAACCCAA TCCCAGATACCCCTTGCTTGGCTGGGGAGGAGGACTGGACCATCAGCCCCGTCCCCCAGAGCATCGTGGA CCTCTTCCAGAATGGAAACTGGACCATGAAGAACCCCTCACCTGCGTGCCAGTGTAGCAGTGACAAAATC AAGAAGATGCTGCCTGTGTGTCCCCCAGGGGCAGGGGGGCTGCCACCTCCTCAGAGAAAACAGAAAACCG CAGACATCCTTCAGAATCTGACAGGAAGAAATATTTCAGATTACCTGGTGAAGACGTACGTGCAGATCAT AGCAAAGAGCTTAAAGAATAAGATCTGGGTGAACGAGTTTCGGTATGGCGGGTTTTCCCTGGGTGTCAGT AATTCTCAAGCACTTCCTCCGAGCCATGAAGTTAATGATGCTATCAAGCAAATGAAGAAACTCCTGAAGC TGACCAAGGACAGCTCCGCAGATCGCTTCCTCAGCAGCCTGGGAAGGTTCATGGCAGGGCTGGATACGAA AAACAATGTCAAGGTGTGGTTCAATAACAAGGGCTGGCATGCTATCAGTTCGTTCCTGAATGTCATCAAC AATGCCATTCTCCGGGCCAACCTGCAGAAGGGAGAGAACCCGAGCCAGTATGGAATCACTGCTTTCAACC ACCCCTTGAACCTCACTAAACAGCAGCTCTCAGAGGTGGCTCTGATGACCACCTCTGTCGACGTCCTCGT GTCTATCTGTGTCATCTTTGCGATGTCCTTTGTCCCTGCCAGCTTTGTTGTGTTCCTGATCCAGGAGCGT GTGAGCAAAGCCAAGCATCTTCAGTTCATCAGCGGCGTGAAGCCTGTCATCTACTGGCTGTCCAATTTTG TCTGGGATATGTGCAATTATGTGGTCCCTGCTACACTGGTCATTATCATCTTCATCTGCTTCCAGCAGAA GTCCTATGTGTCCTCTACCAACCTGCCCGTTCTAGCCCTTCTGCTCTTGCTGTATGGGTGGTCGATCACT CCTCTCATGTATCCAGCATCCTTTGTGTTCAAGATCCCCAGCACCGCCTATGTGGTTCTCACCAGTGTGA ACCTCTTCATCGGCATCAATGGCAGTGTGGCCACTTTCGTACTGGAGCTGTTTACAAACAATAAGCTCAA TGACATCAATGACATCCTGAAGTCTGTGTTTCTTATCTTCCCACATTTTTGCCTGGGGCGAGGGCTCATC GACATGGTGAAGAACCAGGCCATGGCCGATGCCCTGGAGAGGTTTGGGGAGAACCGCTTCGTCTCTCCGC TCTCTTGGGACTTGGTAGGACGGAACCTTTTTGCCATGGCCGTGGAAGGGGTGGTGTTCTTCCTCATTAC TGTTCTGATCCAGTACAGATTTTTCATCAGGCCCAGACCTGTAAAGGCGAAGCTTCCTCCTTTGAATGAC GAGGATGAGGATGTGAGGCGGGAGAGACAGAGGATTCTGGACGGTGGCGGACAGAATGACATCCTAGAGA TCAAGGAACTGACCAAGATCTATAGGAGGAAGCGGAAGCCTGCAGTCGACAGGATCTGCATCGGCATCCC TCCCGGAGAGTGCTTTGGACTCCTGGGAGTTAACGGAGCTGGGAAGTCAACAACTTTCAAGATGCTGACT GGAGACACCCCTGTGACCAGAGGGGATGCGTTCCTTAACAAAAACAGCATCTTATCAAATATCCATGAAG TACACCAGAACATGGGCTACTGCCCTCAGTTTGACGCCATCACAGAGCTGCTGACGGGAAGAGAGCATGT GGAGTTCTTTGCCCTCCTGAGGGGAGTCCCAGAAAAGGAAGTTGGCAAGGTTGGTGAATGGGCAATTCGC AAACTGGGCCTGGTAAAGTATGGAGAAAAATATGCCAGTAACTACAGTGGCGGCAACAAACGAAAGCTCT CCACAGCCATGGCTTTGATTGGCGGACCTCCTGTGGTGTTTCTGGATGAACCAACCACAGGCATGGACCC TAAAGCCCGGAGATTCTTGTGGAATTGTGCCCTAAGCATTGTCAAGGAGGGGAGATCTGTAGTCCTTACA TCTCATAGTATGGAAGAATGTGAAGCTCTTTGTACAAGGATGGCCATAATGGTCAATGGAAGGTTCAGGT GCCTTGGCAGTGTCCAACATCTGAAAAACAGGTTTGGAGATGGTTATACAATAGTTGTACGAATAGCAGG CTCCAACCCTGACCTGAAGCCTGTCCAGGAGTTCTTTGGACTTGCGTTTCCGGGAAGTGTCCTAAAAGAG AAACATCGAAACATGCTTCAGTACCAGCTTCCATCCTCCTTGTCATCTCTAGCCAGGATATTCAGCATCC TCTCCCAGAGCAAAAAGCGACTCCACATAGAAGACTACTCTGTCTCTCAGACAACACTTGACCAAGTATT TGTGAACTTTGCCAAGGACCAAAGTGATGATGACCACTTAAAGGACCTGTCACTGCACAAAAACCAGACA GTTGTGGATGTGGCCGTTCTCACATCCTTTTTGCAGGATGAGAAAGTGAAAGAAAGTTATGTATGA
Translation (2261 aa): MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKAMPSAGTLPWV QGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQRDTSIKDMHKVLRMLRQIKHPNS NLKLQDFLVDNETFSGFLQHNLSLPRSTVDSLLQANVGLQKVFLQGYQLHLASLCNGSKLEEIIQLGDAE VSALCGLPRKKLDAAERVLRYNMDILKPVVTKLNSTSHLPTQHLAEATTVLLDSLGGLAQELFSTKSWSD MRQEVMFLTNVNSSSSSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNNTEEDVDTFYDNS TTPYCNDLMKNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS PQIWTFMENSQEMDLVRTLLDSRGNDQFWEQKLDGLDWTAQDIMAFLAKNPEDVQSPNGSVYTWREAFNE TNQAIQTISRFMECVNLNKLEPIPTEVRLINKSMELLDERKFWAGIVFTGITPDSVELPHHVKYKIRMDI DNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGSEKKTGVYVQQMPYPCYVDD IFLRVMSRSMPLFMTLAWIYSVAVIIKSIVYEKEARLKETMRIMGLDNGILWFSWFVSSLIPLLVSAGLL VVILKLGNLLPYSDPSVVFVFLSVFAMVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDY VGFSIKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTAVSMMLFDTFLYGVMTW YIEAVFPGQYGIPRPWYFPCTKSYWFGEEIDEKSHPGSSQKGVSEICMEEEPTHLRLGVSIQNLVKVYRD GMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSEMSSIRQNLGVCPQ HNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGG SKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKN QLGTGYYLTLVKKDVESSLSSCRNSSSTVSCLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKH VSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE TSDGTLPARRNRRAFGDKQSCLHPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQLKGWKLTQQQFV ALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYNEQYTFVSNDAPEDMG TQELLNALTKDPGFGTRCMEGNPIPDTPCLAGEEDWTISPVPQSIVDLFQNGNWTMKNPSPACQCSSDKI KKMLPVCPPGAGGLPPPQRKQKTADILQNLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVS NSQALPPSHEVNDAIKQMKKLLKLTKDSSADRFLSSLGRFMAGLDTKNNVKVWFNNKGWHAISSFLNVIN NAILRANLQKGENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSIT PLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNDINDILKSVFLIFPHFCLGRGLI DMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVKAKLPPLND EDEDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTFKMLT GDTPVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIR KLGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLT SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFGLAFPGSVLKE KHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDHLKDLSLHKNQT VVDVAVLTSFLQDEKVKESYV
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