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Report for CCDS17503.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17503.1 Public Mus musculus 3 Adam15 23 108 98 CCDS HistoryNCBI Gene:11490Re-query CCDS DB by CCDS ID:17503.1Re-query CCDS DB by GeneID:11490See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17503.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074582.6 ENSMUSP00000074167.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074582.6Link to Ensembl Protein Viewer:ENSMUSP00000074167.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000074582Re-query CCDS DB by Protein ID:ENSMUSP00000074167
Original member NCBI NM_009614.3 NP_033744.1 Updated not alive Link to Nucleotide Sequence:NM_009614.3Link to Protein Sequence:NP_033744.1Re-query CCDS DB by Nucleotide ID:NM_009614Re-query CCDS DB by Protein ID:NP_033744
Current member NCBI NM_009614.4 NP_033744.1 Accepted alive Link to Nucleotide Sequence:NM_009614.4Link to Protein Sequence:NP_033744.1Re-query CCDS DB by Nucleotide ID:NM_009614Re-query CCDS DB by Protein ID:NP_033744Link to BLAST:NP_033744.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033744.1 815 O88839-3 815 100% 0 0

Chromosomal Locations for CCDS 17503.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 89339911 89339953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89340055 89340179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89341508 89341577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89341937 89342075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89342289 89342361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89343113 89343190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89343388 89343583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89343673 89343977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89344118 89344210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89344425 89344599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89344706 89344854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89345279 89345363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89345493 89345662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89345769 89345837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89345943 89346008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89346877 89347066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89347152 89347228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89347407 89347485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89347869 89347945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89348518 89348627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 89349809 89349887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2448 nt):
ATGCGGCTGGCGCTGCTCTGGGCTCTGGGACTCCTGGGCGCGGGCAGCCCTCGGCCCTCCCCGCCGCTGC
CAAATATAGGAGGCACTGAGGAAGAGCAGCAAGCCAGCCCAGAGAGGACGCTGAGTGGATCCATGGAGAG
CCGGGTTGTTCAGGACAGCCCCCCAATGAGCCTAGCAGACGTGCTTCAGACTGGTTTACCTGAGGCCCTG
AGGATTTCCTTGGAGCTGGACAGTGAGAGTCATGTCCTGGAGCTTCTACAAAATAGAGATCTAATCCCTG
GCCGCCCAACTCTGGTGTGGTACCAGCCTGATGGCACCCGAATGGTCAGCGAGGGCTACAGTCTAGAAAA
CTGCTGCTACCGAGGACGAGTGCAGGGCCACCCCAGCTCCTGGGTGTCCCTCTGTGCCTGCTCTGGGATC
AGGGGGCTCATTGTCCTGTCCCCAGAGAGAGGCTATACACTGGAGCTGGGCCCTGGGGACCTTCAGCGTC
CTGTCATTTCTCGGATCCAAGACCACCTGTTGCTGGGCCACACCTGTGCCCCAAGCTGGCATGCCTCTGT
GCCCACTCGGGCAGGACCAGACCTCCTTCTGGAACAGCATCACGCTCACAGGCTTAAGCGAGATGTAGTA
ACAGAGACGAAAATTGTGGAGTTGGTGATTGTGGCTGATAATTCAGAGGTCAGAAAGTACCCTGACTTCC
AACAACTGCTGAACCGGACACTAGAAGCGGCTCTCTTGCTAGACACGTTCTTCCAGCCCTTGAATGTCCG
GGTAGCCCTTGTGGGCCTAGAGGCATGGACCCAGCACAACCTGATAGAAATGAGCTCCAACCCAGCTGTC
CTGCTAGACAACTTCCTCCGCTGGCGCCGGACAGACTTGCTGCCTCGACTGCCCCATGACAGTGCCCAAC
TGGTGACTGTAACTTCCTTCTCTGGTCCCATGGTGGGCATGGCCATTCAGAATTCCATCTGTTCCCCTGA
CTTCTCCGGAGGTGTGAATATGGACCACTCCACAAGCATCTTAGGCGTTGCCTCCTCGATTGCCCATGAA
TTGGGCCACAGTCTGGGTTTGGACCATGATTCTCCCGGGCACAGCTGTCCCTGTCCAGGTCCAGCCCCGG
CTAAGAGCTGCATCATGGAGGCCTCCACAGACTTCCTACCAGGTTTGAACTTCAGCAACTGCAGCCGACA
GGCCCTGGAAAAGGCCCTCCTGGAAGGAATGGGCAGCTGCCTCTTCGAACGGCAACCCAGCCTGGCCCCT
ATGTCCTCTTTGTGTGGAAATATGTTTGTGGACCCCGGAGAGCAGTGTGACTGTGGCTTCCCAGATGAAT
GCACTGATCCCTGCTGTGACCATTTCACCTGCCAGCTGAGGCCAGGAGCGCAGTGTGCATCTGATGGACC
CTGTTGTCAAAACTGCAAGTTGCACCCAGCTGGTTGGCTGTGCCGCCCTCCCACAGACGATTGTGATCTG
CCTGAGTTCTGCCCAGGAGATAGCTCTCAGTGCCCGTCTGACATCAGACTTGGGGACGGTGAGCCTTGTG
CTAGTGGAGAGGCTGTGTGTATGCATGGGCGCTGTGCCTCCTATGCCCGGCAGTGCCAGTCACTTTGGGG
ACCCGGGGCCCAGCCTGCTGCGCCACTTTGCCTCCAAACAGCCAACACTCGGGGTAATGCCTTTGGGAGC
TGTGGGCGCAGCCCTGGTGGTAGCTACATGCCTTGTGCCCCTAGAGATGTCATGTGTGGGCAACTGCAGT
GCCAGTGGGGTAGGAGCCAGCCTCTGTTGGGCTCAGTCCAAGATCGGCTCTCGGAGGTCCTGGAAGCCAA
CGGGACACAGTTAAACTGCAGCTGGGTGGACCTGGACCTGGGCAATGATGTGGCCCAGCCTCTTCTGGCT
CTGCCTGGCACTGCCTGTGGTCCTGGCCTGGTGTGCATCGGCCACCGATGCCAGCCCGTGGATCTCCTGG
GAGCACAGGAATGTCGAAGAAAATGCCACGGCCATGGGGTCTGTGACAGCAGCGGGCACTGCCGCTGTGA
AGAGGGCTGGGCACCTCCAGACTGCATGACCCAGCTCAAAGCAACCAGCTCCCTGACCACAGGCCTGCTC
CTCAGCCTCCTGTTGTTATTGGTCCTCGTACTACTTGGTGCCAGCTACTGGCACCGTGCCCGCCTGCATC
AGCGGCTCTGCCAGCTTAAGGGATCCAGCTGCCAATATAGGGCACCCCAATCCTGTCCTCCTGAACGACC
AGGACCTCCACAGCGGGCACAGCAGATGACAGGCACTAAGTCTCAGGGGCCTACCAAACCCCCACCCCCA
AGAAAGCCACTGCCTGCCAACCCACAGGGCCAGCACCCACCAGGTGACCTGCCTGGCCCAGGAGATGGAA
GCTTGCCGCTGGTGGTGCCCTCCAGGCCAGCTCCACCACCCCCTGCAGCATCTTCGCTCTACCTCTGA

Translation (815 aa):
MRLALLWALGLLGAGSPRPSPPLPNIGGTEEEQQASPERTLSGSMESRVVQDSPPMSLADVLQTGLPEAL
RISLELDSESHVLELLQNRDLIPGRPTLVWYQPDGTRMVSEGYSLENCCYRGRVQGHPSSWVSLCACSGI
RGLIVLSPERGYTLELGPGDLQRPVISRIQDHLLLGHTCAPSWHASVPTRAGPDLLLEQHHAHRLKRDVV
TETKIVELVIVADNSEVRKYPDFQQLLNRTLEAALLLDTFFQPLNVRVALVGLEAWTQHNLIEMSSNPAV
LLDNFLRWRRTDLLPRLPHDSAQLVTVTSFSGPMVGMAIQNSICSPDFSGGVNMDHSTSILGVASSIAHE
LGHSLGLDHDSPGHSCPCPGPAPAKSCIMEASTDFLPGLNFSNCSRQALEKALLEGMGSCLFERQPSLAP
MSSLCGNMFVDPGEQCDCGFPDECTDPCCDHFTCQLRPGAQCASDGPCCQNCKLHPAGWLCRPPTDDCDL
PEFCPGDSSQCPSDIRLGDGEPCASGEAVCMHGRCASYARQCQSLWGPGAQPAAPLCLQTANTRGNAFGS
CGRSPGGSYMPCAPRDVMCGQLQCQWGRSQPLLGSVQDRLSEVLEANGTQLNCSWVDLDLGNDVAQPLLA
LPGTACGPGLVCIGHRCQPVDLLGAQECRRKCHGHGVCDSSGHCRCEEGWAPPDCMTQLKATSSLTTGLL
LSLLLLLVLVLLGASYWHRARLHQRLCQLKGSSCQYRAPQSCPPERPGPPQRAQQMTGTKSQGPTKPPPP
RKPLPANPQGQHPPGDLPGPGDGSLPLVVPSRPAPPPPAASSLYL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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