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Report for CCDS16818.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16818.1 Public Mus musculus 2 Ovol2 23 108 98 CCDS HistoryNCBI Gene:107586Re-query CCDS DB by CCDS ID:16818.1Re-query CCDS DB by GeneID:107586See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16818.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000103171.9 ENSMUSP00000099460.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000103171.9Link to Ensembl Protein Viewer:ENSMUSP00000099460.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000103171Re-query CCDS DB by Protein ID:ENSMUSP00000099460
Original member NCBI NM_152947.2 NP_694455.2 Updated not alive Link to Nucleotide Sequence:NM_152947.2Link to Protein Sequence:NP_694455.2Re-query CCDS DB by Nucleotide ID:NM_152947Re-query CCDS DB by Protein ID:NP_694455
Current member NCBI NM_152947.3 NP_694455.2 Accepted alive Link to Nucleotide Sequence:NM_152947.3Link to Protein Sequence:NP_694455.2Re-query CCDS DB by Nucleotide ID:NM_152947Re-query CCDS DB by Protein ID:NP_694455Link to BLAST:NP_694455.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694455.2 241 Q8CIV7-2 241 100% 0 0

Chromosomal Locations for CCDS 16818.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 144305603 144305919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144317711 144317900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144330904 144331121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 144331302 144331302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGAGCCTGGGCTGTCTGCTCCGCGACCCGCCCGAAGACTGCCGCAGCGACGGCGGCAGTAGCAGCGGCT
GCAGCAGCAGCGCCGGGGAGCCCGGAGGGGCCGAAAGCAGCTCGTCCCCGCGCGCGCCGGAGCCTGAAAC
TCCAGAGCTTCACGACGCCCAAGGCACCGATGGACATCTGGCAGCGATGCAGCGCCCGGTTGCCAGGTCA
AAAATCAAGTTTACCACCGGCACATGCGACAACTCTGTGATTCACAACTGTGACCTTTGTGGCAAGAGCT
TCCGCCTGCAGCGCATGCTCAACCGTCACCTTAAGTGCCACAACCAGGTAAAGAGGCACCTGTGCACCTT
CTGCGGCAAGGGCTTCAATGACACCTTCGACCTGAAGAGGCACGTACGCACGCACACTGGCATCCGCCCC
TACAAATGTGAGGTGTGTAACAAGGCCTTCACCCAGCGGTGTTCCTTGGAGTCCCACCTAAAGAAGATCC
ACGGGGTACAGCAGCAGTATGCCTACAAGCAGCGTCGCGACAAACTCTACGTGTGTGAGGATTGCGGCTA
CACGGGCCCCACCCAGGAGGACCTGTATCTGCATGTGAACAGTGACCATCCAGGGAGCACATTTCTCAAA
AAGACTTCCAAAAAGTTGGCGGCCCTTATGCAGAACAAGCTGACGTCCCCGCTGCAGGAGAATTCCACCC
TGAGTGAAGAGGAGGAAAAAAAGTGA

Translation (241 aa):
MSLGCLLRDPPEDCRSDGGSSSGCSSSAGEPGGAESSSSPRAPEPETPELHDAQGTDGHLAAMQRPVARS
KIKFTTGTCDNSVIHNCDLCGKSFRLQRMLNRHLKCHNQVKRHLCTFCGKGFNDTFDLKRHVRTHTGIRP
YKCEVCNKAFTQRCSLESHLKKIHGVQQQYAYKQRRDKLYVCEDCGYTGPTQEDLYLHVNSDHPGSTFLK
KTSKKLAALMQNKLTSPLQENSTLSEEEEKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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