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Report for CCDS15907.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15907.1 Public Mus musculus 2 Prrc2b 23 108 98 CCDS HistoryNCBI Gene:227723Re-query CCDS DB by CCDS ID:15907.1Re-query CCDS DB by GeneID:227723See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15907.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000036691.13 ENSMUSP00000035734.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000036691.13Link to Ensembl Protein Viewer:ENSMUSP00000035734.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000036691Re-query CCDS DB by Protein ID:ENSMUSP00000035734
Original member Current member NCBI NM_172661.3 NP_766249.2 Accepted alive Link to Nucleotide Sequence:NM_172661.3Link to Protein Sequence:NP_766249.2Re-query CCDS DB by Nucleotide ID:NM_172661Re-query CCDS DB by Protein ID:NP_766249Link to BLAST:NP_766249.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766249.2 1486 Q7TPM1-1 1486 100% 0 0

Chromosomal Locations for CCDS 15907.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 32182512 32182626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32183123 32183300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32185345 32185447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32187481 32187553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32191509 32191652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32193763 32194004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32194380 32194501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32194857 32194996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32199001 32199091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32200826 32201018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32204009 32204324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32206336 32206580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32208640 32208835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32212075 32212291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32216046 32216233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32216612 32216757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32217197 32217335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32218677 32218759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32219214 32219405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32219540 32219737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32220090 32220176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32221080 32221184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32221345 32221537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32222290 32222387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32223419 32223546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32223929 32224169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32226231 32226386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32226945 32227036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32230611 32230650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4461 nt):
ATGTCCGATCGTTTGGGGCAAATAACCCAGGGCAAGGATGGGAAAAGCAAGTACTCGACTCTCAGCCTGT
TTGACAAGTATAAAGGGAGGTCAGTAGGCGCTGTCAGGTCCTCAGTTATTCCTAGACATGGCTTACAGAG
TCTCGGGAAAGTTGCCACAGCCCGGCGTATGCCACCGCCTGCAAACCTGCCAAGCCTGAAGTCTGAAAAC
AAAGGAAACGACCCCAACATCGTGATAGTTCCCAAGGACGGGACAGGATGGGCCAACAAGCAGGACCAGC
AAGACCCAAAGAGTTCCAGTGTGACGGCCTCTCAGCCGCCGGAGTCGCAGCCGCAGCCGGGTTTGCAGAA
ATCTGTCTCCAATTTGCAGAAACCGACACAGTCTATCAGTCAGGAGAACACAAATTCAGTGCCAGGTGGA
CCAAAGTCATGGGCACAGCTGAGTGGAAAGCCAGTCGGACACGAAGGTGGTTTAAGGGGCTCAAGCCGAC
TGTTATCCTTCTCTCCCGAGGAATTTCCGACGCTGAAAGCAGCTGGAGGGCAGGACAAGGCTGGCAAAGA
AAAGGGCGCCTTAGATCTGTCGTATGGGCCAGGACCAAGCCTCCGCCCTCAGAATGTGACAAGCTGGAGG
GAGGGCGGTGGGCGGAACATCATTTCTGCCGCCTCTCTGAGCGCCTCCCCAACAGAGCTGGGCAGCAGGA
ACGCCAGTGGGGCAGACGGAGCCCCTTCCTTGGCATGCACCAGCGATTCTAAGGAGCCCTCTCTCCGCCC
AGCTCAGCCCAGCCGCAGAGGGGCCTCCCAATTCATGGGGCACGGTTACCAGCCACCCACGTACCATGAC
ATGCTCCCAGCGTTTATGTGTTCACCACAGTCATCAGAGAACCAGACTACGGTGGAACGAAGCTCTTTTC
CCCTTCCTCAGCTCCGCCTGGAACCCCGTGTTCCTTTCAGACAGTTCCAGATGAACGACCAAGATGGGAA
AGAAAGGCCAGGCGTGGCACGGCCAGTGCGCCCACTGAGGCAGCTGGTGGAGAGGGCACCAAGGCCCACC
ATCATCAACGCGGAAAACCTGAAGGGCTTGGATGATCTGGACACTGATGCGGATGATGGGTGGGCAGGCC
TCCACGAGGAAGTGGACTATTCCGAGAAACTGAAGTTCAGTGATGATGAAGATGAGGAGGATGTTGTGAA
GGATGGCCGGTCAAAGTGGAACAACTGGGATCCAAGGCGGCAGCGGGCGCTGTCATTGAGCTCTGCAGAC
AGCACTGACGCCAAGCGCACTCAGGAGGAAGGGAAGGACTGGAGTGGAACAGCAGGTGGATCCCGTGTCA
TCCGAAAGGTGCCAGAGCCTCAGCCTCCTTCCAGGAAGCTTCACAGTTGGGCCTCTGGGCCTGACTACCA
GAAACCCACAATGGGCAGCATGTTCCGCCAGCACTCCGCTGAGGACAAGGAGGACAAGCCACCCCCACGG
CAGAAGTTCATCCAGTCAGAGATGTCCGAGGCCGTGGAACGAGCCCGAAAGCGCAGGGAAGAAGAAGAGC
GCCGGGCCCGAGAGGAGAGGCTGGCTGCCTGTGCTGCCAAACTCAAGCAGCTAGACCAGAAGTGCAGGCA
GGCTCAGAAGGCCAATGAGACCCCGAAGCCAGTGGAAAAGGAAGTCCCCCGATCCCCGGGCATTGAGAAG
GTCTCCCCGCCAGAGAATGGGCCTGTTGTCCGCAAAGGCTCCCCAGAGTTCCCTGTCCAAGAAGCACCCA
CCATGTTCTTGGAAGAGACACCTGCAACATCCCCAACAGTCGCTCAGAGCAATAGCAGCAGCAGCAGTAG
CAGCAGTAGCAGCATCGAGGAGGAAGTCCGGGAGTCCGGGTCCCCTGCACAGGAGTTCAGCAAGTACCAG
AAGTCCCTTCCTCCCCGTTTCCAGCGCCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAGC
AGGAGCAGCTGTACAAGATGCAGCACTGGCAGCCGGTCTACCCCCCACCTTCTCACCCCCAGCGCACCTT
CTACCCACACCACCCCCAGATGCTGGGCTTTGACCCACGGTGGATGATGATGCCTTCCTACATGGACCCA
CGCATCACCCCGACACGGACGCCCGTGGACTTCTACCCCTCAGCCCTGCATCCTTCAGGACTGATGAAGC
CCATGATGCCCCAAGAGTCCCTCAGTGGGACTGGCTGTCGCTCTGAAGATCAAAACTGTGTGCCCTCGCT
CCAAGAACGGAAAGTGACCGCCCTCGACCCAGCTCCTGTGTGGAGCCCAGAGGGCTACATGGCACTGCAG
AACAAAGGCTACTCACTGCCCCACCCGAAGTCTGCTGACACTCTGGCCATGGGCATGCATGTCAGGTCTC
CAGATGAGGCCTTGCCTGGAGGCCTTGGCAGCCATTCACCCTATGCCTTGGAGAGAACCACTCACGCCAG
CTCTGACGGTCCTGAAACCCCCAGTAAGAAATCAGAGAGAGAGGTTTCTTTGCCTACCCAGAGGGCTAGT
GAGCAGGAAGAGGCCCGGAAGCAGTTTGACCTGGGCTATGGAAATGCTCTCATTGACAACTGCGCCTCCA
GCCCTGGGGAAGAGAATGAAGCAAGCTCTGTGGTGGGTGAAGGCTTCATTGAAGTCCTGACCAAGAAGCA
GCGTCGCCTGCTGGAGGAGGAGAGAAGAAAAAAAGAACAGGCTGCTCAGGTGCCTGTCAAAGGTCGGGGC
CTTTCATCCCGGATTCCTCCTCGGTTTGCTAAAAAGCAGAACGGCCTGTGTCTGGAGCAAGATGTGACTG
TGCCTGGCAGCAGCCTGGGCACTGAGATCTGGGAGAACAGCAGCCAAGCCCTCCCTGTGCAGGGCGCCGC
CAGTGACTCATGGAGGACAGCTGTCACTGCCTTCAGCAGTACTGAGCCTGGCACCTCAGAGCAGGGGTTT
AAGAGCAGCCAGGGAGATAGTGGCGTTGACTTGAGTGCTGAGTCTCGGGAGTCGTCTGCGACCTCCTCAC
AGCGCAGTTCCCCATATGGCACTCTCAAGCCTGAGGAAATTAGCGGGCCTGGCCTGGCGGAATCTAAGGC
CGACAGCCACAAGGACCAAGCTCAGAAGCAGGCGGAGCACAAGGACTCAGAACAAGGCTCTGCACAGAGC
AAGGAGCACAGACCAGGACCCATCGGCAACGAGCGGTCTCTGAAAAACAGAAAGGGCTCTGAGGGGGCCG
AGCGGCTGCCAGGGGCCGTTGTCCCGCCTGTTAATGGGGTGGAGATTCACGTGGACTCCGTGCTGCCGGT
GCCGCCCATTGAGTTCGGAGTCAGTCCAAAAGACTCTGATTTCAGCCTGCCACCCGGGTCTGTTTCTGGT
CCTGTAGGGAATCCAGTGGCCAAGCTTCAGGACGTCTTGGCTAGTAATGCAGGACTGACGCAGAGTATTC
CCATCCTGCGGCGGGATCACCACATGCAGAGAGCCATCGGCCTCTCTCCCATGTCTTTCCCCACCGCAGA
CCTCACACTAAAGATGGAGTCTGCACGCAAGGCTTGGGAAAACTCCCCCAGTTTGCCAGAGCAGAGCTCT
CCAGGAGGTGCAGGCTCGGGCATCCAGCCTCCATCCTCTGTGGGCGCCTCCAATGGGGTCAACTACAGCT
CCTTTGGTGGAGTGTCGATGCCGCCCATGCCCGTGGCTTCTGTAGCGCCTTCTGCTTCGATACCAGGCAG
CCACCTCCCACCTCTGTACCTGGATGGCCACGTGTTTGCAAGTCAGCCCCGACTGGTTCCTCAAACGATA
CCTCAGCAGCAGAGCTACCAGCAGGCCGCCACTGCCCAGCAGATCCCGATATCCCTTCACACGTCTCTGC
AGGCCCAGGCCCAGCTTGGGCTGAGAGGTGGGCTCCCCGTCTCCCAGTCCCAGGAGATCTTCAGCTCCCT
GCAGCCCTTCAGGTCTCAGGTGTACATGCACCCCAGCCTGTCACCACCCAGCACGATGATCCTCTCAGGG
GGTACAGCCTTGAAGCCCCCATACTCTGCATTTCCTGGCATACAGCCCTTGGAGATGGTGAAGCCCCAGT
CTGGCTCACCCTACCAGCCCATGAGTGGAAACCAGGCCCTGGTCTACGAGGGCCAGCTTGGCCAGGCTGC
CGGGCTGGGCACCTCCCAGATGCTGGATTCCCAGCTCCCACAGCTCACTATGCCACTGCCTCGGTATGGC
TCCGGGCAGCAGCCACTGATCCTGCCACAGTCCATCCAGCTGCCTCCAGGACAGAGTCTCTCTGTTGGAG
CCCCCCGGAGGGTTCCTCCACCTGGCTCCCAACCTCCCGTCCTGAACACCAGCAGAGAGTCCGCTCCGAT
GGAGTTGAAAGGCTTCCACTTTGCCGACAGTAAACAGAATGTTCCTACTGGAGGGTCCGCACCATCCCCG
CAGGCATACAGGCAAAGCGAGTGGATGAAAAACCCGGCCTGGGAACCGTGA

Translation (1486 aa):
MSDRLGQITQGKDGKSKYSTLSLFDKYKGRSVGAVRSSVIPRHGLQSLGKVATARRMPPPANLPSLKSEN
KGNDPNIVIVPKDGTGWANKQDQQDPKSSSVTASQPPESQPQPGLQKSVSNLQKPTQSISQENTNSVPGG
PKSWAQLSGKPVGHEGGLRGSSRLLSFSPEEFPTLKAAGGQDKAGKEKGALDLSYGPGPSLRPQNVTSWR
EGGGRNIISAASLSASPTELGSRNASGADGAPSLACTSDSKEPSLRPAQPSRRGASQFMGHGYQPPTYHD
MLPAFMCSPQSSENQTTVERSSFPLPQLRLEPRVPFRQFQMNDQDGKERPGVARPVRPLRQLVERAPRPT
IINAENLKGLDDLDTDADDGWAGLHEEVDYSEKLKFSDDEDEEDVVKDGRSKWNNWDPRRQRALSLSSAD
STDAKRTQEEGKDWSGTAGGSRVIRKVPEPQPPSRKLHSWASGPDYQKPTMGSMFRQHSAEDKEDKPPPR
QKFIQSEMSEAVERARKRREEEERRAREERLAACAAKLKQLDQKCRQAQKANETPKPVEKEVPRSPGIEK
VSPPENGPVVRKGSPEFPVQEAPTMFLEETPATSPTVAQSNSSSSSSSSSSIEEEVRESGSPAQEFSKYQ
KSLPPRFQRQQQQQQQQQQQQQQQEQLYKMQHWQPVYPPPSHPQRTFYPHHPQMLGFDPRWMMMPSYMDP
RITPTRTPVDFYPSALHPSGLMKPMMPQESLSGTGCRSEDQNCVPSLQERKVTALDPAPVWSPEGYMALQ
NKGYSLPHPKSADTLAMGMHVRSPDEALPGGLGSHSPYALERTTHASSDGPETPSKKSEREVSLPTQRAS
EQEEARKQFDLGYGNALIDNCASSPGEENEASSVVGEGFIEVLTKKQRRLLEEERRKKEQAAQVPVKGRG
LSSRIPPRFAKKQNGLCLEQDVTVPGSSLGTEIWENSSQALPVQGAASDSWRTAVTAFSSTEPGTSEQGF
KSSQGDSGVDLSAESRESSATSSQRSSPYGTLKPEEISGPGLAESKADSHKDQAQKQAEHKDSEQGSAQS
KEHRPGPIGNERSLKNRKGSEGAERLPGAVVPPVNGVEIHVDSVLPVPPIEFGVSPKDSDFSLPPGSVSG
PVGNPVAKLQDVLASNAGLTQSIPILRRDHHMQRAIGLSPMSFPTADLTLKMESARKAWENSPSLPEQSS
PGGAGSGIQPPSSVGASNGVNYSSFGGVSMPPMPVASVAPSASIPGSHLPPLYLDGHVFASQPRLVPQTI
PQQQSYQQAATAQQIPISLHTSLQAQAQLGLRGGLPVSQSQEIFSSLQPFRSQVYMHPSLSPPSTMILSG
GTALKPPYSAFPGIQPLEMVKPQSGSPYQPMSGNQALVYEGQLGQAAGLGTSQMLDSQLPQLTMPLPRYG
SGQQPLILPQSIQLPPGQSLSVGAPRRVPPPGSQPPVLNTSRESAPMELKGFHFADSKQNVPTGGSAPSP
QAYRQSEWMKNPAWEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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