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Report for CCDS15263.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15263.1 Public Mus musculus 1 Il20 23 108 98 CCDS HistoryNCBI Gene:58181Re-query CCDS DB by CCDS ID:15263.1Re-query CCDS DB by GeneID:58181See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15263.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027673.10 ENSMUSP00000027673.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027673.10Link to Ensembl Protein Viewer:ENSMUSP00000027673.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000027673Re-query CCDS DB by Protein ID:ENSMUSP00000027673
Original member Current member NCBI NM_021380.2 NP_067355.1 Accepted alive Link to Nucleotide Sequence:NM_021380.2Link to Protein Sequence:NP_067355.1Re-query CCDS DB by Nucleotide ID:NM_021380Re-query CCDS DB by Protein ID:NP_067355Link to BLAST:NP_067355.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067355.1 176 Q9JKV9 176 100% 0 0

Chromosomal Locations for CCDS 15263.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 130907415 130907492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130908352 130908426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130909575 130909727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130910734 130910799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 130911068 130911226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGAAAGGCTTTGGTCTTGCCTTTGGACTGTTCTCCGCTGTGGGTTTTCTTCTCTGGACTCCTTTAACTG
GGCTCAAGACCCTCCATTTGGGAAGCTGTGTGATTACTGCAAACCTACAGGCAATACAAAAGGAATTTTC
TGAGATTCGGGATAGTGTGCAAGCTGAAGATACAAATATTGACATCAGAATTTTAAGGACGACTGAGTCT
TTGAAAGACATAAAGTCTTTGGATAGGTGCTGCTTCCTTCGTCATCTAGTGAGATTCTATCTGGACAGGG
TATTCAAAGTCTACCAGACCCCTGACCACCATACCCTGAGAAAGATCAGCAGCCTCGCCAACTCCTTTCT
TATCATCAAGAAGGACCTCTCAGTCTGTCATTCTCACATGGCATGTCATTGTGGGGAAGAAGCAATGGAG
AAATACAACCAAATTCTGAGTCACTTCATAGAGTTGGAACTTCAGGCAGCGGTGGTAAAGGCTTTGGGAG
AACTAGGCATTCTTCTGAGATGGATGGAGGAGATGCTATAG

Translation (176 aa):
MKGFGLAFGLFSAVGFLLWTPLTGLKTLHLGSCVITANLQAIQKEFSEIRDSVQAEDTNIDIRILRTTES
LKDIKSLDRCCFLRHLVRFYLDRVFKVYQTPDHHTLRKISSLANSFLIIKKDLSVCHSHMACHCGEEAME
KYNQILSHFIELELQAAVVKALGELGILLRWMEEML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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