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Report for CCDS35945.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35945.1 Public Mus musculus 10 2610028H24Rik 23 108 98 CCDS HistoryNCBI Gene:76964Re-query CCDS DB by CCDS ID:35945.1Re-query CCDS DB by GeneID:76964See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35945.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092406.11 ENSMUSP00000090061.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092406.11Link to Ensembl Protein Viewer:ENSMUSP00000090061.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000092406Re-query CCDS DB by Protein ID:ENSMUSP00000090061
Original member Current member NCBI NM_029816.2 NP_084092.2 Accepted alive Link to Nucleotide Sequence:NM_029816.2Link to Protein Sequence:NP_084092.2Re-query CCDS DB by Nucleotide ID:NM_029816Re-query CCDS DB by Protein ID:NP_084092Link to BLAST:NP_084092.2

Chromosomal Locations for CCDS 35945.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 76449259 76449321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76450633 76450669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76451313 76451386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76452784 76452948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76454705 76454819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76457501 76457616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76457880 76458122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (813 nt):
ATGACGTTGGACTCCTCGATGGCAGATCAGATGACCCGGCTGAGGTTACAACTCCTGGAACAGATGCTGG
AGCAGGAACGGGACAGCATGGACAGAGCAGGACAGCAGGAAAAGTCAGACACAGCCCTCCAGAGTGCTTT
GAGGAGAAGGAAGGACCTTCTACAGAGACTCTGGGAGCAGCAGCTGATGGATGAGCACTCCCCAGCCCAT
GCCTGGAGGATGCATGGAAGAGCTGCAGTGCCAACCCTGAACCCAGAGGTGCCTCCCACAGATGTCTTCC
CTGCTGCCTCCCCACCTTTGCCCCGACCCCCAGAGCCACCAAGGATCATCCAGCACCCGGTCCCCCAGGC
TCCTGCCACCATCATTCAGCAGCTACCGCAGCAGCAGCCACTGATTGCACAGATTTCTCCTCCTCAGGCC
TTTCCCACTCCGAGGTCAGGAAGTATTAAGGAAGACATGGTGGAGATGATGCTGATGCAGAACGCGCAGA
TGCACCAGATTCTCATGCAGAACATGATGCTCAAAGCCCTGCCCCCTGGGTCCTCAGGCCCCCGTGCTGC
TACCCTCCAGGACCAACGATGGATGCACCACGGAGTCCCAAGAGCTGAAAAGCAGAAGCCACCCCCGGTT
CACCACCACCACCACTACGCGCCCACCACTCAGCTGCCCGCTGCCTCCACGGCTGGCGCCCCTGCAGGTT
ATGCCATGTGGCCTCCAGTGGTCGCAGCCACTGCGTTCCCACACGCAGCCAGCTTCTTGCCCACTGTGAG
CCACCTGACCGAGGCATCGACCTCCCATCCTAGCTATCCTTAG

Translation (270 aa):
MTLDSSMADQMTRLRLQLLEQMLEQERDSMDRAGQQEKSDTALQSALRRRKDLLQRLWEQQLMDEHSPAH
AWRMHGRAAVPTLNPEVPPTDVFPAASPPLPRPPEPPRIIQHPVPQAPATIIQQLPQQQPLIAQISPPQA
FPTPRSGSIKEDMVEMMLMQNAQMHQILMQNMMLKALPPGSSGPRAATLQDQRWMHHGVPRAEKQKPPPV
HHHHHYAPTTQLPAASTAGAPAGYAMWPPVVAATAFPHAASFLPTVSHLTEASTSHPSYP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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