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Diospyros tRNA-His gene, complete sequence; photosystem II protein D1 and maturase K genes, complete cds; ribosomal protein S16-like and tRNA-Gln genes, complete sequence; photosystem II protein K gene, complete cds; photosystem II protein I-like, tRNA-Ser, and tRNA-Arg genes, complete sequence; ATP synthase CF1 alpha subunit gene, complete cds; ATP synthase CF0 B subunit-like gene, complete sequence; ATP synthase CF0 C subunit, ATP synthase CF0 A subunit, ribosomal protein S2, and RNA polymerase beta'' subunit genes, complete cds; RNA polymerase beta' subunit-like gene, complete sequence; RNA polymerase beta subunit gene, complete cds; tRNA-Cys gene, complete sequence; cytochrome b6/f complex subunit VIII and PSII M protein genes, complete cds; tRNA-Asp, tRNA-Tyr, tRNA-Glu, and tRNA-Thr genes, complete sequence; photosystem II protein D2 and photosystem II 44 kDa protein genes, complete cds; tRNA-Ser gene, complete sequence; photosystem II protein Z gene, complete cds; tRNA-Met gene, complete sequence; ribosomal protein S14, photosystem I P700 chlorophyll a apoprotein A2, and photosystem I P700 chlorophyll a apoprotein A1 genes, complete cds; photosystem I assembly protein Ycf3-like and tRNA-Ser genes, complete sequence; ribosomal protein S4 gene, complete cds; tRNA-Thr and tRNA-Phe genes, complete sequence; NADH dehydrogenase subunit J, NADH plastoquinone oxidoreductase subunit K, and NADH plastoquinone oxidoreductase subunit C/3 genes, complete cds; tRNA-Met gene, complete sequence; ATP synthase CF1 epsilon subunit, ATP synthase CF1 beta subunit, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, acetyl-CoA carboxylase beta subunit, PSI reaction center subunit VIII, photosystem I assembly protein Ycf4, envelope membrane protein, cytochrome f, photosystem II protein J, photosystem II protein L, photosystem II protein VI, photosystem II protein V, cytochrome b6/f complex subunit VI, and cytochrome b6/f complex subunit V genes, complete cds; tRNA-Trp and tRNA-Pro genes, complete sequence; PSI reaction centre subunit IX, ribosomal protein L33, ribosomal protein S18, and ribosomal protein L20 genes, complete cds; ribosomal protein S12-like and ATP-dependent Clp protease proteolytic subunit-like genes, complete sequence; photosystem II 47 kDa protein, photosystem II protein T, photosystem II protein N, and photosystem II protein H genes, complete cds; cytochrome b6-like gene, complete sequence; cytochrome b6/f complex subunit IV, RNA polymerase alpha subunit, ribosomal protein S11, ribosomal protein L36, translation initiation factor 1, ribosomal protein S8, and ribosomal protein L14 genes, complete cds; ribosomal protein L16-like gene, complete sequence; ribosomal protein S3, ribosomal protein L22, and ribosomal protein S19 genes, complete cds; ribosomal protein L2-like gene, complete sequence; ribosomal protein L23, Ycf2, and Ycf15 genes, complete cds; NADH dehydrogenase subunit 2-like gene, complete sequence; ribosomal protein S12 gene, complete cds; ribosomal protein S12-like, 16S ribosomal RNA, 23S ribosomal RNA, 4.5S ribosomal RNA, 5S ribosomal RNA, tRNA-Arg, and tRNA-Asn genes, complete sequence; NADH dehydrogenase subunit 5, ribosomal protein L32, and cytochrome c biogenesis protein genes, complete cds; NADH dehydrogenase subunit 4-like gene, complete sequence; photosystem I subunit VII, NADH dehydrogenase subunit 4L, NADH dehydrogenase subunit 6, and NADH dehydrogenase subunit I genes, complete cds; NADH dehydrogenase subunit 1-like gene, complete sequence; NADH dehydrogenase subunit 7, ribosomal protein S15, and Ycf1 genes, complete cds; tRNA-Asn, tRNA-Arg, 5S ribosomal RNA, 4.5S ribosomal RNA, 23S ribosomal RNA, 16S ribosomal RNA, and ribosomal protein S12-like genes, complete sequence; ribosomal protein S7 gene, complete cds; NADH dehydrogenase subunit 2-like gene, complete sequence; Ycf15, Ycf2, and ribosomal protein L23 genes, complete cds; and ribosomal protein L2-like gene, complete sequence; plastid.

PopSet: 1342700099

Study Details

Sequencing of whole plastid genomes and nuclear ribosomal DNA of Diospyros species (Ebenaceae) endemic to New Caledonia: many species, little divergence

Turner,B., Paun,O., Munzinger,J., Chase,M.W. and Samuel,R.

Sequences in this data set

  • MG049731.1UNVERIFIED: Diospyros yaouhensis voucher P:00057340 plastid sequence
  • MG049730.1UNVERIFIED: Diospyros vieillardii voucher NOU:023242 plastid sequence
  • MG049729.1UNVERIFIED: Diospyros vieillardii voucher NOU:006676 plastid sequence
  • MG049728.1UNVERIFIED: Diospyros vieillardii voucher NOU:Turner et al. s.n. plastid sequence
  • MG049727.1UNVERIFIED: Diospyros veillonii voucher NOU:019582 plastid sequence
  • MG049726.1UNVERIFIED: Diospyros umbrosa voucher NOU:023234 plastid sequence
  • MG049725.1UNVERIFIED: Diospyros umbrosa voucher NOU:JM 6635 plastid sequence
  • MG049724.1UNVERIFIED: Diospyros trisulca voucher NOU:031344 plastid sequence
  • MG049723.1UNVERIFIED: Diospyros tridentata voucher NOU:052179 plastid sequence
  • MG049722.1UNVERIFIED: Diospyros revolutissima voucher NOU:084762 plastid sequence
  • more...

Alignment

Supplemental Content

Recent activity

  • Diospyros tRNA-His gene, complete sequence; photosystem II protein D1 and matura...
    Diospyros tRNA-His gene, complete sequence; photosystem II protein D1 and maturase K genes, complete cds; ribosomal protein S16-like and tRNA-Gln genes, complete sequence; photosystem II protein K gene, complete cds; photosystem II protein I-like, tRNA-Ser, and tRNA-Arg genes, complete sequence; ATP synthase CF1 alpha subunit gene, complete cds; ATP synthase CF0 B subunit-like gene, complete sequence; ATP synthase CF0 C subunit, ATP synthase CF0 A subunit, ribosomal protein S2, and RNA polymerase beta'' subunit genes, complete cds; RNA polymerase beta' subunit-like gene, complete sequence; RNA polymerase beta subunit gene, complete cds; tRNA-Cys gene, complete sequence; cytochrome b6/f complex subunit VIII and PSII M protein genes, complete cds; tRNA-Asp, tRNA-Tyr, tRNA-Glu, and tRNA-Thr genes, complete sequence; photosystem II protein D2 and photosystem II 44 kDa protein genes, complete cds; tRNA-Ser gene, complete sequence; photosystem II protein Z gene, complete cds; tRNA-Met gene, complete sequence; ribosomal protein S14, photosystem I P700 chlorophyll a apoprotein A2, and photosystem I P700 chlorophyll a apoprotein A1 genes, complete cds; photosystem I assembly protein Ycf3-like and tRNA-Ser genes, complete sequence; ribosomal protein S4 gene, complete cds; tRNA-Thr and tRNA-Phe genes, complete sequence; NADH dehydrogenase subunit J, NADH plastoquinone oxidoreductase subunit K, and NADH plastoquinone oxidoreductase subunit C/3 genes, complete cds; tRNA-Met gene, complete sequence; ATP synthase CF1 epsilon subunit, ATP synthase CF1 beta subunit, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, acetyl-CoA carboxylase beta subunit, PSI reaction center subunit VIII, photosystem I assembly protein Ycf4, envelope membrane protein, cytochrome f, photosystem II protein J, photosystem II protein L, photosystem II protein VI, photosystem II protein V, cytochrome b6/f complex subunit VI, and cytochrome b6/f complex subunit V genes, complete cds; tRNA-Trp and tRNA-Pro genes, complete sequence; PSI reaction centre subunit IX, ribosomal protein L33, ribosomal protein S18, and ribosomal protein L20 genes, complete cds; ribosomal protein S12-like and ATP-dependent Clp protease proteolytic subunit-like genes, complete sequence; photosystem II 47 kDa protein, photosystem II protein T, photosystem II protein N, and photosystem II protein H genes, complete cds; cytochrome b6-like gene, complete sequence; cytochrome b6/f complex subunit IV, RNA polymerase alpha subunit, ribosomal protein S11, ribosomal protein L36, translation initiation factor 1, ribosomal protein S8, and ribosomal protein L14 genes, complete cds; ribosomal protein L16-like gene, complete sequence; ribosomal protein S3, ribosomal protein L22, and ribosomal protein S19 genes, complete cds; ribosomal protein L2-like gene, complete sequence; ribosomal protein L23, Ycf2, and Ycf15 genes, complete cds; NADH dehydrogenase subunit 2-like gene, complete sequence; ribosomal protein S12 gene, complete cds; ribosomal protein S12-like, 16S ribosomal RNA, 23S ribosomal RNA, 4.5S ribosomal RNA, 5S ribosomal RNA, tRNA-Arg, and tRNA-Asn genes, complete sequence; NADH dehydrogenase subunit 5, ribosomal protein L32, and cytochrome c biogenesis protein genes, complete cds; NADH dehydrogenase subunit 4-like gene, complete sequence; photosystem I subunit VII, NADH dehydrogenase subunit 4L, NADH dehydrogenase subunit 6, and NADH dehydrogenase subunit I genes, complete cds; NADH dehydrogenase subunit 1-like gene, complete sequence; NADH dehydrogenase subunit 7, ribosomal protein S15, and Ycf1 genes, complete cds; tRNA-Asn, tRNA-Arg, 5S ribosomal RNA, 4.5S ribosomal RNA, 23S ribosomal RNA, 16S ribosomal RNA, and ribosomal protein S12-like genes, complete sequence; ribosomal protein S7 gene, complete cds; NADH dehydrogenase subunit 2-like gene, complete sequence; Ycf15, Ycf2, and ribosomal protein L23 genes, complete cds; and ribosomal protein L2-like gene, complete sequence; plastid.
    PopSet: 1342700099
    PopSet
  • PopSet Links for Nucleotide (Select 1342702541) (1)
    PopSet
  • ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (plastid)...
    ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial (plastid) [Diospyros vieillardii]
    gi|221078607|gb|ACL99378.1|
    Protein
  • Taxonomy Links for GEO DataSets (Select 2353) (7)
    Taxonomy
  • Diospyros vieillardii voucher Munzinger 2106 (NOU) trnK gene, intron; and matura...
    Diospyros vieillardii voucher Munzinger 2106 (NOU) trnK gene, intron; and maturase K (matK) gene, complete cds; plastid
    gi|221079032|gb|EU980986.1|
    Nucleotide

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