Entry - *613846 - TECTONIC FAMILY, MEMBER 2; TCTN2 - OMIM
 
* 613846

TECTONIC FAMILY, MEMBER 2; TCTN2


Alternative titles; symbols

TECTONIC 2; TECT2


HGNC Approved Gene Symbol: TCTN2

Cytogenetic location: 12q24.31     Genomic coordinates (GRCh38): 12:123,671,113-123,708,399 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
12q24.31 ?Meckel syndrome 8 613885 AR 3
Joubert syndrome 24 616654 AR 3

TEXT

Cloning and Expression

By searching databases for sequences similar to TCTN1 (609863), Reiter and Skarnes (2006) identified mouse and human TCTN2 and TCTN3 (613847). The deduced mouse Tctn2 protein contains 700 amino acids. It has an N-terminal signal peptide and a C-terminal transmembrane domain that is conserved in Drosophila tectonic.


Mapping

Hartz (2011) mapped the TCTN2 gene to chromosome 12q24.31 based on an alignment of the TCTN2 sequence (GenBank AK023037) with the genomic sequence (GRCh37).


Gene Function

Shaheen et al. (2011) performed RT-PCR to quantitate expression of Tctn2 in various mouse adult tissues. Tctn2 expression was identified in all tissues, with significant expression in brain, kidney, and eye, organs affected by the MKS phenotype. Studies of developmental expression in the mouse detected significant expression at embryonic day 8.5 in the neural tube, most notably in the rhombomere of the future hindbrain. By embryonic day 10.5, Tctn2 mRNA was found throughout the mouse brain, the length of the neural tube, and the growing edge of the limb buds, heart, and eye. Furthermore, strong Tctn2 expression was observed in kidney from embryonic day 14.5 mouse embryo.


Molecular Genetics

Meckel Syndrome 8

Shaheen et al. (2011) identified homozygosity for a splice site mutation in the TCTN2 gene (613846.0001) in a family segregating Meckel-Gruber syndrome-8 (MKS8; 613885).

Joubert Syndrome 24

In 6 patients from 3 unrelated families with Joubert syndrome-24 (JBTS24; 616654), Sang et al. (2011) identified 3 different homozygous mutations in the TCTN2 gene (613846.0002-613836.0004). The mutations were found by genome linkage analysis of families with ciliopathies and by targeting candidate genes identified through modeling of network disease pathways focused on ciliopathies. Functional studies of the variants were not performed, although all were predicted to result in a loss of function.

In a 7.5-year-old Turkish boy, born of consanguineous parents, with JBTS24, Huppke et al. (2015) identified a homozygous splice site mutation in the TCTN2 gene (613846.0002). The mutation was found by whole-exome sequencing and confirmed by Sanger sequencing. No patient material was available for further studies.


Animal Model

Garcia-Gonzalo et al. (2011) found that Tctn2-null mouse embryos lacked nodal cilia, and that cilia in neural tubes were scarce and morphologically defective and failed to elongate axonemes. However, basal bodies docked normally to the plasma membrane. Cilia numbers were reduced in the limb bud mesenchyme, but cilia appeared normal. The findings were similar to those of Tctn1 (609863)-null mice, indicating a common function, and showed that Tctn1 and Tctn2 affect ciliogenesis in a tissue-specific manner. Garcia-Gonzalo et al. (2011) also demonstrated that Tctn2 and Tctn1 interact with other proteins in a large complex localized to the transition zone between the ciliary axoneme and the basal body.


ALLELIC VARIANTS ( 4 Selected Examples):

.0001 MECKEL SYNDROME, TYPE 8 (1 family)

TCTN2, IVS13AS, A-G, -2
  
RCV000024072...

In affected members of a multiplex consanguineous Arab family with Meckel-Gruber syndrome (MKS8; 613885), Shaheen et al. (2011) identified homozygosity for a splice site mutation in the TCTN2 gene at the -2 position of exon 14 (1506-2A-G) that disrupted splicing and created 2 aberrant transcripts. The first transcript introduces 104 basepairs from intron 13-14 and would delete 196 original amino acids, introduce 2 novel amino acids, and prematurely terminate the 697-amino acid protein at residue 504. The second transcript lacks exon 14 and would delete 195 original amino acids, introduce 4 novel amino acids, and prematurely terminate the protein at residue 507. The mutation segregated with the disease in the family and was not observed in 192 ethnically matched controls.


.0002 JOUBERT SYNDROME 24

TCTN2, IVS10AS, G-A, -1
  
RCV000202333

In a 7.5-year-old Turkish boy, born of consanguineous parents, with Joubert syndrome-24 (JBTS24; 616654), Huppke et al. (2015) identified a homozygous G-to-A transition (c.1235-1G-A, NM_024809.4) in intron 10 of the TCTN2 gene. The mutation, which was found by whole-exome sequencing and confirmed by Sanger sequencing, was not present in public databases, including dbSNP (build 138) or an in-house control database. The unaffected mother was heterozygous for the mutation. The mutation was predicted to result in the in-frame skipping of exon 11 and the loss of 26 amino acids. No cDNA was available from the patient to validate the consequences of the mutation on the transcript.

Sang et al. (2011) had previously identified this mutation (IVS10-1GA) in the TCTN2 gene in a 6-year-old Turkish girl (family A1443), born of consanguineous parents, with JBTS24. The mutation was demonstrated to result in the in-frame skipping of exon 11 in patient cells. The child's unaffected parents were heterozygous for the mutation, which was not found in control sets of 90 Caucasians and 86 ethnically matched individuals. The mutation was found by genome linkage analysis of families with ciliopathies and by targeting candidate genes identified through modeled network disease pathways focused on ciliopathies.


.0003 JOUBERT SYNDROME 24

TCTN2, GLN625TER
  
RCV000202341...

In 4 sibs (family MR20), born of consanguineous Pakistani parents, with Joubert syndrome-24 (JBTS24; 616654), Sang et al. (2011) identified a homozygous c.1873C-T transition in exon 16 of the TCTN2 gene, resulting in a gln625-to-ter (Q625X) substitution. The mutation segregated with the disorder in the family.


.0004 JOUBERT SYNDROME 24

TCTN2, 1-BP INS, 77G
  
RCV000201539...

In a patient (UW95-3) of East Indian descent with Joubert syndrome-24 (JBTS24; 616654), Sang et al. (2011) identified a homozygous 1-bp insertion (c.77insG) in exon 1 of the TCTN2 gene, resulting in a frameshift and premature termination (Asp26GlyfsTer51).


REFERENCES

  1. Garcia-Gonzalo, F. R., Corbit, K. C., Sirerol-Piquer, M. S., Ramaswami, G., Otto, E. A., Noriega, T. R., Seol, A. D., Robinson, J. F., Bennett, C. L., Josifova, D. J., Garcia-Verdugo, J. M., Katsanis, N., Hildebrandt, F., Reiter, J. F. A transition zone complex regulates mammalian ciliogenesis and ciliary membrane composition. Nature Genet. 43: 776-784, 2011. [PubMed: 21725307, images, related citations] [Full Text]

  2. Hartz, P. A. Personal Communication. Baltimore, Md. 3/29/2011.

  3. Huppke, P., Wegener, E., Bohrer-Rabel, H., Bolz, H. J., Zoll, B., Gartner, J., Bergmann, C. Tectonic gene mutations in patients with Joubert syndrome. Europ. J. Hum. Genet. 23: 616-620, 2015. [PubMed: 25118024, images, related citations] [Full Text]

  4. Reiter, J. F., Skarnes, W. C. Tectonic, a novel regulator of the Hedgehog pathway required for both activation and inhibition. Genes Dev. 20: 22-27, 2006. [PubMed: 16357211, images, related citations] [Full Text]

  5. Sang, L., Miller, J. J., Corbit, K. C., Giles, R. H., Brauer, M. J., Otto, E. A., Baye, L. M., Wen, X., Scales, S. J., Kwong, M., Huntzicker, E. G., Stakianos, M. K., and 20 others. Mapping the NPHP-JBTS-MKS protein network reveals ciliopathy disease genes and pathways. Cell 145: 513-528, 2011. [PubMed: 21565611, images, related citations] [Full Text]

  6. Shaheen, R., Faqeih, E., Seidahmed, M. Z., Sunker, A., Alali, F. E., AlQahtani, K., Alkuraya, F. S. A TCTN2 mutation defines a novel Meckel Gruber syndrome locus. Hum. Mutat. 32: 573-578, 2011. [PubMed: 21462283, related citations] [Full Text]


Cassandra L. Kniffin - updated : 11/23/2015
Cassandra L. Kniffin - updated : 8/18/2011
Ada Hamosh - updated : 4/8/2011
Creation Date:
Patricia A. Hartz : 3/29/2011
carol : 11/23/2015
ckniffin : 11/23/2015
carol : 8/13/2015
ckniffin : 4/13/2015
alopez : 8/23/2011
ckniffin : 8/18/2011
carol : 6/22/2011
terry : 4/26/2011
alopez : 4/8/2011
terry : 4/8/2011
terry : 4/8/2011
mgross : 3/29/2011
mgross : 3/29/2011

* 613846

TECTONIC FAMILY, MEMBER 2; TCTN2


Alternative titles; symbols

TECTONIC 2; TECT2


HGNC Approved Gene Symbol: TCTN2

Cytogenetic location: 12q24.31     Genomic coordinates (GRCh38): 12:123,671,113-123,708,399 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
12q24.31 ?Meckel syndrome 8 613885 Autosomal recessive 3
Joubert syndrome 24 616654 Autosomal recessive 3

TEXT

Cloning and Expression

By searching databases for sequences similar to TCTN1 (609863), Reiter and Skarnes (2006) identified mouse and human TCTN2 and TCTN3 (613847). The deduced mouse Tctn2 protein contains 700 amino acids. It has an N-terminal signal peptide and a C-terminal transmembrane domain that is conserved in Drosophila tectonic.


Mapping

Hartz (2011) mapped the TCTN2 gene to chromosome 12q24.31 based on an alignment of the TCTN2 sequence (GenBank AK023037) with the genomic sequence (GRCh37).


Gene Function

Shaheen et al. (2011) performed RT-PCR to quantitate expression of Tctn2 in various mouse adult tissues. Tctn2 expression was identified in all tissues, with significant expression in brain, kidney, and eye, organs affected by the MKS phenotype. Studies of developmental expression in the mouse detected significant expression at embryonic day 8.5 in the neural tube, most notably in the rhombomere of the future hindbrain. By embryonic day 10.5, Tctn2 mRNA was found throughout the mouse brain, the length of the neural tube, and the growing edge of the limb buds, heart, and eye. Furthermore, strong Tctn2 expression was observed in kidney from embryonic day 14.5 mouse embryo.


Molecular Genetics

Meckel Syndrome 8

Shaheen et al. (2011) identified homozygosity for a splice site mutation in the TCTN2 gene (613846.0001) in a family segregating Meckel-Gruber syndrome-8 (MKS8; 613885).

Joubert Syndrome 24

In 6 patients from 3 unrelated families with Joubert syndrome-24 (JBTS24; 616654), Sang et al. (2011) identified 3 different homozygous mutations in the TCTN2 gene (613846.0002-613836.0004). The mutations were found by genome linkage analysis of families with ciliopathies and by targeting candidate genes identified through modeling of network disease pathways focused on ciliopathies. Functional studies of the variants were not performed, although all were predicted to result in a loss of function.

In a 7.5-year-old Turkish boy, born of consanguineous parents, with JBTS24, Huppke et al. (2015) identified a homozygous splice site mutation in the TCTN2 gene (613846.0002). The mutation was found by whole-exome sequencing and confirmed by Sanger sequencing. No patient material was available for further studies.


Animal Model

Garcia-Gonzalo et al. (2011) found that Tctn2-null mouse embryos lacked nodal cilia, and that cilia in neural tubes were scarce and morphologically defective and failed to elongate axonemes. However, basal bodies docked normally to the plasma membrane. Cilia numbers were reduced in the limb bud mesenchyme, but cilia appeared normal. The findings were similar to those of Tctn1 (609863)-null mice, indicating a common function, and showed that Tctn1 and Tctn2 affect ciliogenesis in a tissue-specific manner. Garcia-Gonzalo et al. (2011) also demonstrated that Tctn2 and Tctn1 interact with other proteins in a large complex localized to the transition zone between the ciliary axoneme and the basal body.


ALLELIC VARIANTS 4 Selected Examples):

.0001   MECKEL SYNDROME, TYPE 8 (1 family)

TCTN2, IVS13AS, A-G, -2
SNP: rs374349989, gnomAD: rs374349989, ClinVar: RCV000024072, RCV000305893, RCV000727919, RCV001261610, RCV002513219, RCV003987331, RCV003993750

In affected members of a multiplex consanguineous Arab family with Meckel-Gruber syndrome (MKS8; 613885), Shaheen et al. (2011) identified homozygosity for a splice site mutation in the TCTN2 gene at the -2 position of exon 14 (1506-2A-G) that disrupted splicing and created 2 aberrant transcripts. The first transcript introduces 104 basepairs from intron 13-14 and would delete 196 original amino acids, introduce 2 novel amino acids, and prematurely terminate the 697-amino acid protein at residue 504. The second transcript lacks exon 14 and would delete 195 original amino acids, introduce 4 novel amino acids, and prematurely terminate the protein at residue 507. The mutation segregated with the disease in the family and was not observed in 192 ethnically matched controls.


.0002   JOUBERT SYNDROME 24

TCTN2, IVS10AS, G-A, -1
SNP: rs863225425, ClinVar: RCV000202333

In a 7.5-year-old Turkish boy, born of consanguineous parents, with Joubert syndrome-24 (JBTS24; 616654), Huppke et al. (2015) identified a homozygous G-to-A transition (c.1235-1G-A, NM_024809.4) in intron 10 of the TCTN2 gene. The mutation, which was found by whole-exome sequencing and confirmed by Sanger sequencing, was not present in public databases, including dbSNP (build 138) or an in-house control database. The unaffected mother was heterozygous for the mutation. The mutation was predicted to result in the in-frame skipping of exon 11 and the loss of 26 amino acids. No cDNA was available from the patient to validate the consequences of the mutation on the transcript.

Sang et al. (2011) had previously identified this mutation (IVS10-1GA) in the TCTN2 gene in a 6-year-old Turkish girl (family A1443), born of consanguineous parents, with JBTS24. The mutation was demonstrated to result in the in-frame skipping of exon 11 in patient cells. The child's unaffected parents were heterozygous for the mutation, which was not found in control sets of 90 Caucasians and 86 ethnically matched individuals. The mutation was found by genome linkage analysis of families with ciliopathies and by targeting candidate genes identified through modeled network disease pathways focused on ciliopathies.


.0003   JOUBERT SYNDROME 24

TCTN2, GLN625TER
SNP: rs863225426, ClinVar: RCV000202341, RCV003765308

In 4 sibs (family MR20), born of consanguineous Pakistani parents, with Joubert syndrome-24 (JBTS24; 616654), Sang et al. (2011) identified a homozygous c.1873C-T transition in exon 16 of the TCTN2 gene, resulting in a gln625-to-ter (Q625X) substitution. The mutation segregated with the disorder in the family.


.0004   JOUBERT SYNDROME 24

TCTN2, 1-BP INS, 77G
SNP: rs863225222, ClinVar: RCV000201539, RCV000202326

In a patient (UW95-3) of East Indian descent with Joubert syndrome-24 (JBTS24; 616654), Sang et al. (2011) identified a homozygous 1-bp insertion (c.77insG) in exon 1 of the TCTN2 gene, resulting in a frameshift and premature termination (Asp26GlyfsTer51).


REFERENCES

  1. Garcia-Gonzalo, F. R., Corbit, K. C., Sirerol-Piquer, M. S., Ramaswami, G., Otto, E. A., Noriega, T. R., Seol, A. D., Robinson, J. F., Bennett, C. L., Josifova, D. J., Garcia-Verdugo, J. M., Katsanis, N., Hildebrandt, F., Reiter, J. F. A transition zone complex regulates mammalian ciliogenesis and ciliary membrane composition. Nature Genet. 43: 776-784, 2011. [PubMed: 21725307] [Full Text: https://doi.org/10.1038/ng.891]

  2. Hartz, P. A. Personal Communication. Baltimore, Md. 3/29/2011.

  3. Huppke, P., Wegener, E., Bohrer-Rabel, H., Bolz, H. J., Zoll, B., Gartner, J., Bergmann, C. Tectonic gene mutations in patients with Joubert syndrome. Europ. J. Hum. Genet. 23: 616-620, 2015. [PubMed: 25118024] [Full Text: https://doi.org/10.1038/ejhg.2014.160]

  4. Reiter, J. F., Skarnes, W. C. Tectonic, a novel regulator of the Hedgehog pathway required for both activation and inhibition. Genes Dev. 20: 22-27, 2006. [PubMed: 16357211] [Full Text: https://doi.org/10.1101/gad.1363606]

  5. Sang, L., Miller, J. J., Corbit, K. C., Giles, R. H., Brauer, M. J., Otto, E. A., Baye, L. M., Wen, X., Scales, S. J., Kwong, M., Huntzicker, E. G., Stakianos, M. K., and 20 others. Mapping the NPHP-JBTS-MKS protein network reveals ciliopathy disease genes and pathways. Cell 145: 513-528, 2011. [PubMed: 21565611] [Full Text: https://doi.org/10.1016/j.cell.2011.04.019]

  6. Shaheen, R., Faqeih, E., Seidahmed, M. Z., Sunker, A., Alali, F. E., AlQahtani, K., Alkuraya, F. S. A TCTN2 mutation defines a novel Meckel Gruber syndrome locus. Hum. Mutat. 32: 573-578, 2011. [PubMed: 21462283] [Full Text: https://doi.org/10.1002/humu.21507]


Contributors:
Cassandra L. Kniffin - updated : 11/23/2015
Cassandra L. Kniffin - updated : 8/18/2011
Ada Hamosh - updated : 4/8/2011

Creation Date:
Patricia A. Hartz : 3/29/2011

Edit History:
carol : 11/23/2015
ckniffin : 11/23/2015
carol : 8/13/2015
ckniffin : 4/13/2015
alopez : 8/23/2011
ckniffin : 8/18/2011
carol : 6/22/2011
terry : 4/26/2011
alopez : 4/8/2011
terry : 4/8/2011
terry : 4/8/2011
mgross : 3/29/2011
mgross : 3/29/2011