Entry - *606973 - COMPONENT OF OLIGOMERIC GOLGI COMPLEX 1; COG1 - OMIM
* 606973

COMPONENT OF OLIGOMERIC GOLGI COMPLEX 1; COG1


Alternative titles; symbols

LOW DENSITY LIPOPROTEIN RECEPTOR DEFECT B-COMPLEMENTING PROTEIN; LDLB
KIAA1381


HGNC Approved Gene Symbol: COG1

Cytogenetic location: 17q25.1     Genomic coordinates (GRCh38): 17:73,193,055-73,208,507 (from NCBI)


Gene-Phenotype Relationships
Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
17q25.1 Congenital disorder of glycosylation, type IIg 611209 AR 3

TEXT

Description

Multiprotein complexes are key determinants of Golgi apparatus structure and its capacity for intracellular transport and glycoprotein modification. Several complexes have been identified, including the Golgi transport complex (GTC), the LDLC complex, which is involved in glycosylation reactions, and the SEC34 complex, which is involved in vesicular transport. These 3 complexes are identical and have been termed the conserved oligomeric Golgi (COG) complex, which includes COG1 (Ungar et al., 2002).


Cloning and Expression

Using an expression cloning strategy, Chatterton et al. (1999) obtained a mouse cDNA encoding Ldlb. By EST database searching, they obtained the human homolog. The deduced 980-amino acid cytoplasmic human protein is 82% identical to the mouse sequence. Expression of the mouse gene in ldlB Chinese hamster ovary (CHO) cells corrected their LDLR (606945) deficiency, which includes N- and O-glycosylation defects. Chatterton et al. (1999) found that a cytosolic complex containing Ldlc (606974) requires Ldlb for Golgi association.

By searching for cDNAs with the potential to encode large proteins expressed in brain, Nagase et al. (2000) identified a partial cDNA encoding LDLB, which they termed KIAA1381. RT-PCR analysis detected ubiquitous expression that was highest in liver, testis, and ovary. Within brain, expression was highest in amygdala, subthalamic nucleus, thalamus, and cerebellum.

By SDS-PAGE analysis of bovine brain cytosol, Ungar et al. (2002) identified the 8 subunits of the COG complex. Immunofluorescence microscopy demonstrated that COG1 colocalizes with COG7 (606978), as well as with COG3 (606975) and COG5 (606821), with a Golgi marker in a perinuclear distribution. Immunoprecipitation analysis showed that all COG subunits interact with COG2 (LDLC). Immunoblot analysis confirmed that COG1 is not expressed in ldlB CHO cell mutants and that its absence does not alter the levels of COPB (600959), which is also involved in secretion. Ungar et al. (2002) concluded that the COG complex is critical for the structure and function of the Golgi apparatus and can influence intracellular membrane trafficking.


Mapping

The International Radiation Hybrid Mapping Consortium mapped the COG1 gene to chromosome 17 (A004R48).


Molecular Genetics

In a patient with congenital disorder of glycosylation type IIg (CDG2G; 611209), Foulquier et al. (2006) identified a homozygous mutation in the COG1 gene (606973.0001).

In 2 patients with a CDG2G, which the authors designated cerebrocostomandibular-like syndrome (611209), Zeevaert et al. (2009) identified a homozygous splice site mutation in the COG1 gene (606973.0002).


ALLELIC VARIANTS ( 2 Selected Examples):

.0001 CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIg

COG1, 1-BP INS, 2659C
  
RCV000990056...

In a patient with congenital disorder of glycosylation type IIg (CDG2G; 611209), Foulquier et al. (2006) identified a homozygous 1-bp insertion (2659insC) in the COG1 gene, resulting in premature termination of the protein with a loss of 80 amino acids. Cellular studies showed that the mutation destabilized several other COG subunits and altered their subcellular localization and the overall integrity of the COG complex. Both parents were heterozygous for the mutation.


.0002 CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIg

COG1, IVS6DS, G-A, +5
  
RCV000003840...

In 2 patients with congenital disorder of glycosylation type IIg (CDG2G; 611209), Zeevaert et al. (2009) identified a homozygous G-to-A transition in intron 6 of the COG1 gene (1070+5G-A), resulting in the skipping of exon 6, a frameshift, and a prematurely terminated protein of 321 amino acids. RT-PCR analysis showed 3% of normal transcript in 1 patient compared with controls, suggesting that the mutation is a leaky mutation. Zeevaert et al. (2009) noted that the phenotype in these patients was similar to cerebrocostomandibular syndrome and they designated the disorder cerebrocostomandibular-like syndrome.


REFERENCES

  1. Chatterton, J. E., Hirsch, D., Schwartz, J. J., Bickel, P. E., Rosenberg, R. D., Lodish, H. F., Krieger, M. Expression cloning of LDLB, a gene essential for normal Golgi function and assembly of the ldlCp complex. Proc. Nat. Acad. Sci. 96: 915-920, 1999. [PubMed: 9927668, images, related citations] [Full Text]

  2. Foulquier, F., Vasile, E., Schollen, E., Callewaert, N., Raemaekers, T., Quelhas, D., Jaeken, J., Mills, P., Winchester, B., Krieger, M., Annaert, W., Matthijs, G. Conserved oligomeric Golgi complex subunit 1 deficiency reveals a previously uncharacterized congenital disorder of glycosylation type II. Proc. Nat. Acad. Sci. 103: 3764-3769, 2006. [PubMed: 16537452, images, related citations] [Full Text]

  3. Nagase, T., Kikuno, R., Ishikawa, K., Hirosawa, M., Ohara, O. Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro. DNA Res. 7: 65-73, 2000. [PubMed: 10718198, related citations] [Full Text]

  4. Ungar, D., Oka, T., Brittle, E. E., Vasile, E., Lupashin, V. V., Chatterton, J. E., Heuser, J. E., Krieger, M., Waters, M. G. Characterization of a mammalian Golgi-localized protein complex, COG, that is required for normal Golgi morphology and function. J. Cell Biol. 157: 405-415, 2002. [PubMed: 11980916, images, related citations] [Full Text]

  5. Zeevaert, R., Foulquier, F., Dimitrov, B., Reynders, E., Van Damme-Lombaerts, R., Simeonov, E., Annaert, W., Matthijs, G., Jaeken, J. Cerebrocostomandibular-like syndrome and a mutation in the conserved oligomeric Golgi complex, subunit 1. Hum. Molec. Genet. 18: 517-524, 2009. [PubMed: 19008299, related citations] [Full Text]


George E. Tiller - updated : 7/31/2009
Cassandra L. Kniffin - updated : 7/17/2007
Creation Date:
Paul J. Converse : 5/23/2002
carol : 03/26/2017
carol : 08/17/2015
carol : 9/20/2013
carol : 1/14/2011
wwang : 8/14/2009
terry : 7/31/2009
wwang : 7/31/2007
ckniffin : 7/17/2007
ckniffin : 6/5/2002
mgross : 5/28/2002
mgross : 5/23/2002

* 606973

COMPONENT OF OLIGOMERIC GOLGI COMPLEX 1; COG1


Alternative titles; symbols

LOW DENSITY LIPOPROTEIN RECEPTOR DEFECT B-COMPLEMENTING PROTEIN; LDLB
KIAA1381


HGNC Approved Gene Symbol: COG1

SNOMEDCT: 718750004;  


Cytogenetic location: 17q25.1     Genomic coordinates (GRCh38): 17:73,193,055-73,208,507 (from NCBI)


Gene-Phenotype Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
17q25.1 Congenital disorder of glycosylation, type IIg 611209 Autosomal recessive 3

TEXT

Description

Multiprotein complexes are key determinants of Golgi apparatus structure and its capacity for intracellular transport and glycoprotein modification. Several complexes have been identified, including the Golgi transport complex (GTC), the LDLC complex, which is involved in glycosylation reactions, and the SEC34 complex, which is involved in vesicular transport. These 3 complexes are identical and have been termed the conserved oligomeric Golgi (COG) complex, which includes COG1 (Ungar et al., 2002).


Cloning and Expression

Using an expression cloning strategy, Chatterton et al. (1999) obtained a mouse cDNA encoding Ldlb. By EST database searching, they obtained the human homolog. The deduced 980-amino acid cytoplasmic human protein is 82% identical to the mouse sequence. Expression of the mouse gene in ldlB Chinese hamster ovary (CHO) cells corrected their LDLR (606945) deficiency, which includes N- and O-glycosylation defects. Chatterton et al. (1999) found that a cytosolic complex containing Ldlc (606974) requires Ldlb for Golgi association.

By searching for cDNAs with the potential to encode large proteins expressed in brain, Nagase et al. (2000) identified a partial cDNA encoding LDLB, which they termed KIAA1381. RT-PCR analysis detected ubiquitous expression that was highest in liver, testis, and ovary. Within brain, expression was highest in amygdala, subthalamic nucleus, thalamus, and cerebellum.

By SDS-PAGE analysis of bovine brain cytosol, Ungar et al. (2002) identified the 8 subunits of the COG complex. Immunofluorescence microscopy demonstrated that COG1 colocalizes with COG7 (606978), as well as with COG3 (606975) and COG5 (606821), with a Golgi marker in a perinuclear distribution. Immunoprecipitation analysis showed that all COG subunits interact with COG2 (LDLC). Immunoblot analysis confirmed that COG1 is not expressed in ldlB CHO cell mutants and that its absence does not alter the levels of COPB (600959), which is also involved in secretion. Ungar et al. (2002) concluded that the COG complex is critical for the structure and function of the Golgi apparatus and can influence intracellular membrane trafficking.


Mapping

The International Radiation Hybrid Mapping Consortium mapped the COG1 gene to chromosome 17 (A004R48).


Molecular Genetics

In a patient with congenital disorder of glycosylation type IIg (CDG2G; 611209), Foulquier et al. (2006) identified a homozygous mutation in the COG1 gene (606973.0001).

In 2 patients with a CDG2G, which the authors designated cerebrocostomandibular-like syndrome (611209), Zeevaert et al. (2009) identified a homozygous splice site mutation in the COG1 gene (606973.0002).


ALLELIC VARIANTS 2 Selected Examples):

.0001   CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIg

COG1, 1-BP INS, 2659C
SNP: rs747606976, gnomAD: rs747606976, ClinVar: RCV000990056, RCV002223257

In a patient with congenital disorder of glycosylation type IIg (CDG2G; 611209), Foulquier et al. (2006) identified a homozygous 1-bp insertion (2659insC) in the COG1 gene, resulting in premature termination of the protein with a loss of 80 amino acids. Cellular studies showed that the mutation destabilized several other COG subunits and altered their subcellular localization and the overall integrity of the COG complex. Both parents were heterozygous for the mutation.


.0002   CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIg

COG1, IVS6DS, G-A, +5
SNP: rs1568296260, ClinVar: RCV000003840, RCV001849253

In 2 patients with congenital disorder of glycosylation type IIg (CDG2G; 611209), Zeevaert et al. (2009) identified a homozygous G-to-A transition in intron 6 of the COG1 gene (1070+5G-A), resulting in the skipping of exon 6, a frameshift, and a prematurely terminated protein of 321 amino acids. RT-PCR analysis showed 3% of normal transcript in 1 patient compared with controls, suggesting that the mutation is a leaky mutation. Zeevaert et al. (2009) noted that the phenotype in these patients was similar to cerebrocostomandibular syndrome and they designated the disorder cerebrocostomandibular-like syndrome.


REFERENCES

  1. Chatterton, J. E., Hirsch, D., Schwartz, J. J., Bickel, P. E., Rosenberg, R. D., Lodish, H. F., Krieger, M. Expression cloning of LDLB, a gene essential for normal Golgi function and assembly of the ldlCp complex. Proc. Nat. Acad. Sci. 96: 915-920, 1999. [PubMed: 9927668] [Full Text: https://doi.org/10.1073/pnas.96.3.915]

  2. Foulquier, F., Vasile, E., Schollen, E., Callewaert, N., Raemaekers, T., Quelhas, D., Jaeken, J., Mills, P., Winchester, B., Krieger, M., Annaert, W., Matthijs, G. Conserved oligomeric Golgi complex subunit 1 deficiency reveals a previously uncharacterized congenital disorder of glycosylation type II. Proc. Nat. Acad. Sci. 103: 3764-3769, 2006. [PubMed: 16537452] [Full Text: https://doi.org/10.1073/pnas.0507685103]

  3. Nagase, T., Kikuno, R., Ishikawa, K., Hirosawa, M., Ohara, O. Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro. DNA Res. 7: 65-73, 2000. [PubMed: 10718198] [Full Text: https://doi.org/10.1093/dnares/7.1.65]

  4. Ungar, D., Oka, T., Brittle, E. E., Vasile, E., Lupashin, V. V., Chatterton, J. E., Heuser, J. E., Krieger, M., Waters, M. G. Characterization of a mammalian Golgi-localized protein complex, COG, that is required for normal Golgi morphology and function. J. Cell Biol. 157: 405-415, 2002. [PubMed: 11980916] [Full Text: https://doi.org/10.1083/jcb.200202016]

  5. Zeevaert, R., Foulquier, F., Dimitrov, B., Reynders, E., Van Damme-Lombaerts, R., Simeonov, E., Annaert, W., Matthijs, G., Jaeken, J. Cerebrocostomandibular-like syndrome and a mutation in the conserved oligomeric Golgi complex, subunit 1. Hum. Molec. Genet. 18: 517-524, 2009. [PubMed: 19008299] [Full Text: https://doi.org/10.1093/hmg/ddn379]


Contributors:
George E. Tiller - updated : 7/31/2009
Cassandra L. Kniffin - updated : 7/17/2007

Creation Date:
Paul J. Converse : 5/23/2002

Edit History:
carol : 03/26/2017
carol : 08/17/2015
carol : 9/20/2013
carol : 1/14/2011
wwang : 8/14/2009
terry : 7/31/2009
wwang : 7/31/2007
ckniffin : 7/17/2007
ckniffin : 6/5/2002
mgross : 5/28/2002
mgross : 5/23/2002