PubChem | Glycans

Symbol Nomenclature for Glycans (SNFG)

Created: October 15, 2015; Last updated: February 26, 2024


 

Standardization in drawing glycan structures is essential for efficient communication. The tools and methodology illustrated here have become widely accepted by the scientific community. Use of these symbols to represent glycans is now strongly recommended for all scientific manuscripts and other publications. The following are pages with additional information about the Symbol Nomenclature For Glycans (SNFG):

History of the SNFG

The SNFG Discussion Group

Organizations and Publications Adopting SNFG

Software tools supporting the SNFG

Primary citation for the SNFG:

Other citations:

Page Content

SNFG rendering programs

  1. 3D-Symbol Nomenclature for Glycans (3D-SNFG): Create 3D atomic models of glycans
    Direct weblink | Citation link.
  2. DrawGlycan SNFG: Convert IUPAC input strings to sketches of glycans and glycopeptides
    Direct weblink | App download | Citation link.
  3. GlycanBuilder2-SNFG: GlycanBuilder updated to handle SNFG
    App download | Citation link.
  4. CSDB glycan editor: Creates SNFG and 3D-models of glycans and derivatives, and converts them to various notations
    Direct weblink | Citation link.

Symbol Nomenclature

Downloadable files: Drawing format | Presentation/Slide format

Each symbol represents a specific monosaccharide or class of monosaccharides found in nature. Hover over the symbol with pointer to see the full monosaccharide name. Click on a symbol to link to the corresponding PubChem entry. Symbols can also be copied with embedded links from the table using right/control-click or highlight-copy (highlight a symbol, then control-c [on pc], or command⌘-c [on mac]). However links may not copy in some browsers. Symbols with embedded PubChem URLs are therefore also available in the presentation/slide format attachments (see links above the table). A high-quality SVG object file is also provided.

Table 1. Monosaccharide symbol nomenclature (Download TSV data file)

SHAPEWhite
(Generic)
BlueGreenYellowOrangePinkPurpleLight BlueBrownRed
Filled CircleImage for Hexose
Hexose
Symbol for D-Glucose
Glc
Symbol for D-Mannose
Man
Symbol for D-Galactose
Gal
Symbol for D-Gulose
Gul
Symbol for L-Altrose
Alt
Symbol for D-Allose
All
Symbol for D-Talose
Tal
Symbol for L-Idose
Ido
Filled SquareImage for HexNAc
HexNAc
Symbol for N-Acetyl-D-glucosamine
GlcNAc
Symbol for N-Acetyl-D-mannosamine
ManNAc
Symbol for N-Acetyl-D-galactosamine
GalNAc
Symbol for N-Acetyl-D-gulosamine
GulNAc
Symbol for N-Acetyl-L-altrosamine
AltNAc
Symbol for N-Acetyl-D-allosamine
AllNAc
Symbol for N-Acetyl-D-talosamine
TalNAc
Symbol for N-Acetyl-L-idosamine
IdoNAc
Crossed SquareImage for Hexosamine
Hexosamine
Symbol for D-Glucosamine
GlcN
Symbol for D-Mannosamine
ManN
Symbol for D-Galactosamine
GalN
Symbol for D-Gulosamine
GulN
Symbol for L-Altrosamine
AltN
Symbol for D-Allosamine
AllN
Symbol for D-Talosamine
TalN
Symbol for L-Idosamine
IdoN
Divided DiamondImage for Hexuronate
Hexuronate
Symbol for D-Glucuronic acid
GlcA
Symbol for D-Mannuronic acid
ManA
Symbol for D-Galacturonic acid
GalA
Symbol for D-Guluronic acid
GulA
Symbol for L-Altruronic acid
AltA
Symbol for D-Alluronic acid
AllA
Symbol for D-Taluronic acid
TalA
Symbol for L-Iduronic acid
IdoA
Filled TriangleImage for Deoxyhexose
Deoxyhexose
Symbol for D-Quinovose
Qui
Symbol for L-Rhamnose
Rha
Symbol for 6-Deoxy-D-gulose
6dGul
Symbol for 6-Deoxy-L-altrose
6dAlt
Symbol for 6-Deoxy-D-talose
6dTal
Symbol for L-Fucose
Fuc
Divided TriangleImage for DeoxyhexNAc
DeoxyhexNAc
Symbol for N-Acetyl-D-quinovosamine
QuiNAc
Symbol for N-Acetyl-L-rhamnosamine
RhaNAc
Symbol for N-Acetyl-6-deoxy-L-altrosamine
6dAltNAc
Symbol for N-Acetyl-6-deoxy-D-talosamine
6dTalNAc
Symbol for N-Acetyl-L-fucosamine
FucNAc
Flat RectangleImage for Di-deoxyhexose
Di-deoxyhexose
Symbol for Olivose
Oli
Symbol for Tyvelose
Tyv
Symbol for Abequose
Abe
Symbol for Paratose
Par
Symbol for D-Digitoxose
Dig
Symbol for Colitose
Col
Filled StarImage for Pentose
Pentose
Symbol for L-Arabinose
Ara
Symbol for D-Lyxose
Lyx
Symbol for D-Xylose
Xyl
Symbol for D-Ribose
Rib
Filled DiamondImage for 3-deoxy-nonulosonic acids
3-deoxy-nonulosonic acids
Symbol for 3-Deoxy-D-glycero-D-galacto-nonulosonic acid
Kdn
Symbol for N-Acetylneuraminic acid
Neu5Ac
Symbol for N-Glycolylneuraminic acid
Neu5Gc
Symbol for Neuraminic acid
Neu
Symbol for Sialic acid
Sia
Flat DiamondImage for 3,9-dideoxy-nonulosonic acids
3,9-dideoxy-nonulosonic acids
Symbol for Pseudaminic acid
Pse
Symbol for Legionaminic acid
Leg
Symbol for Acinetaminic acid
Aci
Symbol for 4-Epilegionaminic acid
4eLeg
Flat HexagonImage for Unknown sacchride
Unknown
Symbol for Bacillosamine
Bac
Symbol for L-glycero-D-manno-Heptose
LDmanHep
Symbol for 3-Deoxy-D-manno-octulosonic acid
Kdo
Symbol for 3-Deoxy-D-lyxo-heptulosaric acid
Dha
Symbol for D-glycero-D-manno-Heptose
DDmanHep
Symbol for N-Acetylmuramic acid
MurNAc
Symbol for N-Glycolylmuramic acid
MurNGc
Symbol for Muramic acid
Mur
PentagonImage for Assigned sacchride
Assigned
Symbol for L-Apiose
Api
Symbol for D-Fructose
Fru
Symbol for D-Tagatose
Tag
Symbol for L-Sorbose
Sor
Symbol for D-Psicose
Psi

Notes

  1. General: The monosaccharide symbols presented here are from the Fourth Edition of the Essentials of Glycobiology. They are extended from the symbols in the Second Edition to cover a wider range of monosaccharides found in nature. While previous versions allowed conversion of monosaccharide symbols to black and white representation, this is no longer possible. A listing of abbreviated, full, and complete names of all assigned monosaccharides is provided in Table 4. Selected examples depicting SNFG usage are presented below, for various living organisms.
  2. Drawing recommendations: All downloadable symbols follow CMYK colors as shown in Table 2, which were generated in Adobe Illustrator. Recommended CMYK to RGB conversion is also provided. While there is no hard rule, glycans are typically sketched to orient their non-reducing end in either the left or upward direction.
  3. Shape, color and symbol orientation: Shapes and colors are completely consistent with stereochemistry only for hexoses, hexosamines, N-acetylhexosamines, hexuronic acids, and pentoses. Shapes only are consistent for deoxyhexoses, deoxy-N-acetylhexosamines, dideoxyhexoses, and nonulosonic acids. Avoid rotating the symbols.
  4. Ring configuration: A colored symbol encodes a defined monosaccharide (including D or L) independent of rotation or mirroring. Pyranose form is assumed by default for all monosaccharides except Api. Symbols used at the reducing end without specification of α/β represent all forms that a monosaccharide can adopt due to mutarotation. A few monosaccharides have absolute configurations implicitly specified in their name (D for Abe, Bac, Dha, Kdo, Mur, Par, Tyv; L for Col; DD for Kdn, Neu, Leg, 4eLeg; LL for Pse, Aci; LD for 8eLeg; DL for 8eAci). For all other residues, absolute configuration is assumed by default: L for Ara, Fuc, Ido, IdoA, Rha, Alt, AltA, Sor, Api; and D for other monosaccharides.
    Less common configurations need to be stated in a figure legend or by adding letters inside the symbol (e.g., adding D or L to the symbol). Epimers at C8 of nonulosonic acids can be indicated by adding "8D" or "8L" inside the symbol (8L for 8eLeg, 8D for 8eAci). Furanose rings can be indicated by adding an italicized "f", alditols indicated with an italicized "o", and open ring at the reducing end using "a" inside the symbol. Other modifications of the monosaccharide base stereochemistry can be specified using two letters within the monosaccharide symbol: "en" for didehydro, "an" for anhydro, "on" for lactone and "am" for lactam. The default carbon positions for these modifications in sialic acids are at 2-3 for en, 2-7 for an, 1-7 for on, and 1-5 for am. Departures from this default should be specified in figure footnotes/legends.
  5. Linkage presentation: Anomeric notation and destination linkage can be indicated in IUPAC style in figures, with or without a dash and with or without the originating carbon number (but with no commas or spacing) (e.g., Neu5Acα2-3Galβ1-4GlcNAc, Neu5Acα3Galβ4GlcNAc, or equivalents in symbol drawings).
    All monosaccharide glycosidic linkages are assumed to originate from C-1, except for 2-ketoses, which are assumed to be linked from C-2. Linkages in the schematics should be sorted to appear in the clockwise order, with the linkages to the lowest carbon number occurring to the left. Optionally, these may also follow the Oxford System that embeds both the specificity and anomericity of the monosaccharide linkages. Dual linkages (e.g., an outgoing linkage from an aldose in open form) can be shown by double lines. Linkages involving carbon-carbon bond (e.g., in C-glycosides) can be shown in different color. An internal phosphodiester can be shown with -P- between the symbols for the linked monosaccharides, with linkage positions specified.
  6. Nonulosonic acids (including sialic acids): Specific symbols are provided for the core sialic acids (3-deoxy-non-2-ulosonic acids / 3-deoxy-nonulosonic acids): Neu, Neu5Ac, Neu5Gc, and Kdn. Symbols are also available for the core sialic-acid like 3,9-dideoxy-non-2-ulosonic acids / 3,9-dideoxy-nonulosonic acids: pseudaminic acid (Pse), legionaminic acid (Leg), acinetaminic acid (Aci) and 4-epi-legionaminic acid (4eLeg). Modifications to these monosaccharides may be indicated in diagrams (e.g., 9Ac for 9-O-acetylation). A red diamond can be used for any Sia (sialic acid, type unknown, whether Neu5Gc or Neu5Ac, or any of the other >90 forms known to date). The NulO concept page provides a detailed catalog of currently known NulOs, primary citations and related database links.
  7. Carbohydrate modifications: Modification of any base monosaccharide by chemical substituent is described using a number indicating the linkage position and text indicating the substituent-type, e.g., 3S for 3-O-sulfate, 6P for 6-O-phosphate, and 4,6Pyr for 4,6-pyruvyl [4,6-O-(1-carboxyethylidene)]. The abbreviated text used to describe common substituents is listed in Table 3, along with associated chemical drawings. The following guidelines are used to describe monosaccharide substituents:
    i) Substituent names and abbreviations are guided by IUPAC convention, but common names are also allowed to keep with usage in the field and to enhance human readability.
    ii) Substituent abbreviations are ideally 2-3 letters long. To save space, subscripts maybe dropped, e.g. Kdn4,7Ac2 is pictorially depicted as a green diamond with 4,7Ac rather than 4,7Ac2.
    iii) Avoid numbers when describing substituents if possible, in order to reduce confusion with number used to depict linkage position. If numbers are necessary, then the substituent should be enclosed within parenthesis.
    iv) Substituents should appear in alphabetical order based on Table 3. If the same modification appears at multiple carbon-locations this should be presented in numerical order. If the position of modification is unknown, this may be indicated using ?, e.g. ?Me if the methyl location of substituent is not known.
    v) The attachment of a substituent to the hydroxyl group on the base monosaccharide would result in an O-linked substituent and similar modification on amine would indicate N-linked addition. Thus, Neu4,5Ac28Me indicates O-acetylation at C4 of Neu (neuraminic acid), N-acetyl at C5, and O-methyl at C8.
    vi). Substituents may be concatenated to indicate multiple modifications, with position indicated for the first substituent, e.g. 'Neu5(Gc2Ac)' depicting the C5 modification of Neu by a glycolyl group which is further modified by O-acetyl at C2 of the glycolyl substituent. If a given string concatenation results in a non-unique chemical description, the exact chemical structure should be provided using IUPAC rules.
    vii) The presence of variable amounts of substituents can be indicated using +/- symbol or by indicating % presence if known, e.g. "60% 3Ac" to indicate presence of 3Ac on 60% of a residue or repeating unit.
    viii) Substituents not in Table 3 may be included using above guidelines with footnotes describing the entity type/chemistry. A symbol (like *, † or ‡) above the SNFG monosaccharide and associated footnote may also be used when text describing substituent becomes large.
  8. Amino substitution: The position for N-substitution is assumed in the base symbol to be at the most common site(s), for example the 2-position of glucosamine, the 5-position of neuraminic acid, and the 5 & 7 positions of pseudaminic acid. By default, it is assumed that these N-substituted groups are modified, e.g., NS for N-sulfate group on glucosamine is assumed to be at the 2-position. For monosaccharides in which nitrogen is not implicit in its structure, add a number to the N (e.g., Rha4N is shown as a green triangle with 4N attached). Additionally, atypical acetamido groups may be represented using NAc (e.g. Fuc4NAc is shown using red triangle with 4NAc attached).
  9. Ambiguous linkage position and glycan mixtures: Brackets (either straight or curly) indicate attachment of specific monosaccharides or structures to any residue within the glycan. Restrictions on the nature of attachment are specified by including linkage data on the bond outside the brackets. Constraints on attachment site are shown using asterisk followed by a number (*#), specified both on the bond and its attachment site(s). Such renderings are used to indicate ambiguity in the structure of a specific glycan. By extension, glycan mixtures may be depicted by including [number range] along the bond as shown in the examples.
  10. Ambiguous monosaccharides: White symbols based on the standard shapes designate monosaccharides with unknown/undefined stereochemistry (e.g., a white circle designates a hexose, type not defined, or a white diamond, any deoxynonulosonic acid). Other unknown or partially defined monosaccharides may be represented using a white flat hexagon.
  11. Structures not present in table and non-glycan assignments: Monosaccharides absent in Table 1 or modifications that cannot be represented using the above rules, may be indicated using a single non-italicized letter (A..Z) within an SNFG white symbol, with additional details provided in figure footnote or legends. The choice of white symbol to use should fit the generic type if possible: circle for hexose, triangle for deoxyhexose etc.; otherwise, the white pentagon should be used. Any black shape can be used to depict non-monosaccharide structures and detailed definitions should be provided in figure legends. More complicated modifications of the SNFG are discouraged, and if these modifications are made should not be referred to as following the SNFG nomenclature.

Examples of Glycan Symbol Nomenclature

Glycan examples 1
Glycan examples 2
Glycan examples 2


Table 2. CMYK and RGB color assignments (Download TSV data file)

ColorCMYK settingsRGB settings
White0/0/0/0255/255/255
Blue100/50/0/00/114/188
Green100/0/100/00/166/81
Yellow0/15/100/0255/212/0
Light blue41/5/3/0143/204/233
Pink0/47/24/0246/158/161
Purple38/88/0/0165/67/153
Brown32/48/76/13161/122/77
Orange0/65/100/0244/121/32
Red0/100/100/0237/28/36
* CMYK colors are presented as %



Table 3. Monosaccharide substituents and abbreviations* (Download TSV data file)

AbbreviationSubstituent
Acacetyl
AlaD-alanyl
Ala2AcN-acetyl-D-alanyl
AmN-acetimidoyl
AmMeN-(N-methyl-acetimidoyl)
AmMe2N-(N,N-dimethyl-acetimidoyl)
Foformyl
Gcglycolyl
Gln2AcN-acetyl-glutaminyl
5Glu2MeN-methyl-5-glutamyl
Glyglycyl
Grglyceryl
Gr2,3Me22,3-di-O-methyl-glyceryl
4Hb4-hydroxybutyryl
3,4Hb3,4-dihydroxybutyryl
3RHb(R)-3-hydroxybutyryl
3SHb(S)-3-hydroxybutyryl
Ltlactyl
Memethyl
Namino
NAcN-acetyl
Pphosphate
Pypyruvyl
Pyr1-carboxyethylidene
Ssulfate
Tautauryl

*If multiple substituents are attached to a single monosaccharide, in the SNFG rendering, the substituent abbreviations appear in alphabetical order.

Chemical structure of substituents

Chemical structure of substituents

Table 4. Monosaccharide abbreviations and names (Download TSV data file)

AbbreviationShort NameSystematic nameStructureCIDSID
4eLeg4-epi-Legionaminic acid5,7-Diamino-3,5,7,9-tetradeoxy-D-glycero-D-talo-non-2-ulopyranosonic acid126961780252089092
6dAlt6-Deoxy-L-altrose6-Deoxy-L-altropyranose12302958252300980
6dAltNAcN-Acetyl-6-deoxy-L-altrosamine2-Acetamido-2,6-dideoxy-L-altropyranose126961777336286661
6dGul6-Deoxy-D-gulose6-Deoxy-D-gulopyranose12302960336286660
6dTal6-Deoxy-D-talose6-Deoxy-D-talopyranose44119431252301016
6dTalNAcN-Acetyl-6-deoxy-D-talosamine2-Acetamido-2,6-dideoxy-D-talopyranose126961778336286662
8eAci8-epi-Acinetaminic acid5,7-Diamino-3,5,7,9-tetradeoxy-D-glycero-L-altro-non-2-ulopyranosonic acid168009119480493268
8eLeg8-epi-Legionaminic acid5,7-Diamino-3,5,7,9-tetradeoxy-L-glycero-D-galacto-non-2-ulopyranosonic acid168009112252090150
AbeAbequose3,6-Dideoxy-D-xylo-hexopyranose160540252091216
AciAcinetaminic acid5,7-Diamino-3,5,7,9-tetradeoxy-L-glycero-L-altro-non-2-ulopyranosonic acid126961779252089094
AllD-AlloseD-Allopyranose439507251973843
AllAD-Alluronic acidD-Allopyranuronic acid6602103251973908
AllND-Allosamine2-Amino-2-deoxy-D-allopyranose6915732251973859
AllNAcN-Acetyl-D-allosamine2-Acetamido-2-deoxy-D-allopyranose10944029251973851
AltL-AltroseL-Altropyranose10219674251973845
AltAL-Altruronic acidL-Altropyranuronic acid56845780252300979
AltNL-Altrosamine2-Amino-2-deoxy-L-altropyranose6602094251973836
AltNAcN-Acetyl-L-altrosamine2-Acetamido-2-deoxy-L-altropyranose44717159251973853
ApiL-Apiose3-C-(Hydroxymethyl)-L-erythro-tetrofuranose12306753252106892
AraL-ArabinoseL-Arabinopyranose439195252089084
BacBacillosamine2,4-Diamino-2,4,6-trideoxy-D-glucopyranose54029194252091138
ColColitose3,6-Dideoxy-L-xylo-hexopyranose12303780252091214
DDmanHepD-glycero-D-manno-HeptoseD-glycero-D-manno-Heptopyranose53681436252301021
Dha3-Deoxy-D-lyxo-heptulosaric acid3-Deoxy-D-lyxo-hept-2-ulopyranosaric acid15608515252090263
DigD-Digitoxose2,6-Dideoxy-D-ribo-hexopyranose2723626252301018
FruD-FructoseD-arabino-Hex-2-ulopyranose2723872252106896
FucL-Fucose6-Deoxy-L-galactopyranose17106251973912
FucNAcN-Acetyl-L-fucosamine2-Acetamido-2,6-dideoxy-L-galactopyranose91810489252089082
GalD-GalactoseD-Galactopyranose6036251973840
GalAD-Galacturonic acidD-Galactopyranuronic acid439215251973905
GalND-Galactosamine2-Amino-2-deoxy-D-galactopyranose24154251973856
GalNAcN-Acetyl-D-galactosamine2-Acetamido-2-deoxy-D-galactopyranose35717251973848
GlcD-GlucoseD-Glucopyranose5793251973837
GlcAD-Glucuronic acidD-Glucopyranuronic acid94715251973835
GlcND-Glucosamine2-Amino-2-deoxy-D-glucopyranose439213251973854
GlcNAcN-Acetyl-D-glucosamine2-Acetamido-2-deoxy-D-glucopyranose439174251973846
GulD-GuloseD-Gulopyranose441033251973842
GulAD-Guluronic acidD-Gulopyranuronic acid11788788251973907
GulND-Gulosamine2-Amino-2-deoxy-D-gulopyranose9920528251973858
GulNAcN-Acetyl-D-gulosamine2-Acetamido-2-deoxy-D-gulopyranose13201633251973850
IdoL-IdoseL-Idopyranose11030410251973844
IdoAL-Iduronic acidL-Idopyranuronic acid441039251973909
IdoNL-Idosamine2-Amino-2-deoxy-L-idopyranose91864695251973839
IdoNAcN-Acetyl-L-idosamine2-Acetamido-2-deoxy-L-idopyranose13201636251973852
Kdn2-Keto-3-deoxy-nononic acid3-Deoxy-D-glycero-D-galacto-non-2-ulopyranosonic acid13991616252089089
Kdo3-Deoxy-D-manno-octulosonic acid3-Deoxy-D-manno-oct-2-ulopyranosonic acid10857507252090262
LegLegionaminic acid5,7-Diamino-3,5,7,9-tetradeoxy-D-glycero-D-galacto-non-2-ulopyranosonic acid70678967252089090
LDmanHepL-glycero-D-manno-HeptoseL-glycero-D-manno-Heptopyranose21120522252301020
LyxD-LyxoseD-Lyxopyranose439240252089085
ManD-MannoseD-Mannopyranose18950251973838
ManAD-Mannuronic acidD-Mannopyranuronic acid439630251973904
ManND-Mannosamine2-Amino-2-deoxy-D-mannopyranose440049251973855
ManNAcN-Acetyl-D-mannosamine2-Acetamido-2-deoxy-D-mannopyranose439281251973847
MurMuramic acid2-Amino-3-O-[(R)-1-carboxyethyl]-2-deoxy-D-glucopyranose441038252301022
MurNAcN-Acetylmuramic acid2-Acetamido-3-O-[(R)-1-carboxyethyl]-2-deoxy-D-glucopyranose5462244252091139
MurNGcN-Glycolylmuramic acid3-O-[(R)-1-Carboxyethyl]-2-deoxy-2-hydroxyacetamido-D-glucopyranose91810748252090151
NeuNeuraminic acid5-Amino-3,5-dideoxy-D-glycero-D-galacto-non-2-ulopyranosonic acid441037252301019
Neu5AcN-Acetylneuraminic acid5-Acetamido-3,5-dideoxy-D-glycero-D-galacto-non-2-ulopyranosonic acid439197252089093
Neu5GcN-Glycolylneuraminic acid3,5-Dideoxy-5-hydroxyacetamido-D-glycero-D-galacto-non-2-ulopyranosonic acid440001252089091
OliOlivose2,6-Dideoxy-D-arabino-hexopyranose10888063252301017
ParParatose3,6-Dideoxy-D-ribo-hexopyranose12303783252106894
PsePseudaminic acid5,7-Diamino-3,5,7,9-tetradeoxy-L-glycero-L-manno-non-2-ulopyranosonic acid101137651252089088
PsiD-PsicoseD-ribo-Hex-2-ulopyranose441036252106897
QuiD-Quinovose6-Deoxy-D-glucopyranose439746251973910
QuiNAcN-Acetyl-D-quinovosamine2-Acetamido-2,6-dideoxy-D-glucopyranose11954187251973913
RhaL-Rhamnose6-Deoxy-L-mannopyranose25310251973911
RhaNAcN-Acetyl-L-rhamnosamine2-Acetamido-2,6-dideoxy-L-mannopyranose91807222251973914
RibD-RiboseD-Ribopyranose10975657252089083
SiaSialic acidSialic acid residue of unspecified type341861327
SorL-SorboseL-xylo-Hex-2-ulopyranose439192252091215
TagD-TagatoseD-lyxo-Hex-2-ulopyranose439312252106895
TalD-TaloseD-Talopyranose441035251973841
TalAD-Taluronic acidD-Talopyranuronic acid11298488251973906
TalND-Talosamine2-Amino-2-deoxy-D-talopyranose9834117251973857
TalNAcN-Acetyl-D-talosamine2-Acetamido-2-deoxy-D-talopyranose57376616251973849
TyvTyvelose3,6-Dideoxy-D-arabino-hexopyranose12303782252106893
XylD-XyloseD-Xylopyranose135191252089086

Clicking on the abbreviation leads to the corresponding entry in PubChem

Updates

Feburary 26, 2024 (Version 2.0.4)

  1. Add monosaccharide depictions and corresponding identifiers, CIDs and SIDs.
  2. Add table data download in TSV format.

August 20, 2023 (Version 2.0.3)

  1. Minor edits made to the chemical structures in the substituent table.
  2. SNFG reference collection initiated at NCBI-pubchem.

October 19, 2022 (Version 2.0.2)

  1. SNFG adopts the creative commons CC0 license. This formalizes the open-source nature of this community-driven endeavor.

September 1, 2022 (Version 2.0.1)

  1. Minor edits to clarify footnotes #7 and #8, and update to one of the SNFG examples.

June 27, 2022 (Version 2.0)

  1. SNFG expanded to describe sialic acid and sialic acid-like monosaccharides.
  2. Substituent table added, along with figure describing their chemical structures.
  3. SNFG notes expanded to include new guidelines on how to describe substituents.
  4. SNFG examples and presentation slides redone with more examples, and refinements.
  5. SNFG Table 1 redone with higher resolution images.
  6. SNFG versioning initiated in order to aid compliance with FAIR principles.
  7. Rules added to describe open ring configurations (aldehyde, ketone) at free reducing end.

February 4, 2020 (Version 1.5)

  1. Rules added for specification of symbol and bond orientation.

November 20, 2019 (Version 1.4)

  1. SNFG now provides guidelines to depict ambiguous linkages and glycan mixtures using bracket notation.

May 9, 2019 (Version 1.3)

  1. Footnote 7 modified to accommodate variable modifications.
  2. More SNFG usage examples added.

January 22, 2019 (Version 1.2)

  1. SNFG page reorganized with new examples from mammals, yeast, slime mold, insects, bacteria and plants.
  2. The new examples focus on how to present carbohydrate structures in diverse organisms and ambiguous monosaccharide assignments.
  3. Number of footnotes reduced from 28 to 10, and thematically organized in order to simplify usage.
  4. Single non-italicized letter is now allowed in white symbols to help describe monosaccharides that are not part of the SNFG table and that cannot be described using existing footnotes.
  5. SNFG Discussion Group list updated.

June 5, 2017 (Version 1.1)

  1. SNFG Discussion Group Listing added.
  2. White diamond now indicates any deoxynonulosonic acid.
  3. Flattened diamond introduced for any dideoxynonulosonic acid.
  4. Additional symbols added for 6dGul, 6dAltNAc, 6dTalNAc, Pse, Leg, Aci and 4eLeg.
  5. Drawglycan-SNFG and Glycanbuilder 2-SNFG adopted, link to web site provided.
  6. Updates to Appendix 52A. Organizations and publications adopting SNFG.
  7. RGB color code provided in addition to CMYK
  8. Multiple minor corrections and additions to nomenclature and rules of display.

August 31, 2016 (Version 1.0)

  1. Link to new Appendix 52A. Organizations and Publications Adopting SNFG.
  2. Red diamond introduced for Sia (sialic acid, type unspecified). White diamond indicates any nonulosonic acid.
  3. A 3D Symbol Nomenclature for Glycans (3D-SNFG) adopted, link to web site provided.
  4. Multiple minor corrections and additions to nomenclature and rules of display.

License

The SNFG is distributed using the public domain CC0 license (https://creativecommons.org/publicdomain/zero/1.0/). This means that users are free to copy, distribute, display and make commercial use of the standard and data shown on this page.