Lonrf1 LON peptidase N-terminal domain and ring finger 1 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Lonrf1provided by MGI
Official Full Name: LON peptidase N-terminal domain and ring finger 1provided by MGI
Primary source: MGI:MGI:3609241
See related: Ensembl:ENSMUSG00000039633 AllianceGenome:MGI:3609241
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary: Predicted to enable ubiquitin protein ligase activity. Predicted to be located in cytoplasm. Orthologous to human LONRF1 (LON peptidase N-terminal domain and ring finger 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Ubiquitous expression in bladder adult (RPKM 7.0), ovary adult (RPKM 5.3) and 28 other tissues See more
Orthologs: human all
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Genomic context

Location:: 8 A4; 8 23.05 cM

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	8	NC_000074.7 (36683216..36716513, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	8	NC_000074.6 (36216062..36249359, complement)

Chromosome 8 - NC_000074.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Transcriptomic characterization of Lonrf1 at the single-cell level under pathophysiological conditions.
Title: Transcriptomic characterization of Lonrf1 at the single-cell level under pathophysiological conditions.

Submit: New GeneRIF Correction

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

AU048745 (e-PCR)
- UniSTS:145195

NoName (e-PCR)
- UniSTS:235873

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables ubiquitin protein ligase activity	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: LON peptidase N-terminal domain and RING finger protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001081150.2 → NP_001074619.2 LON peptidase N-terminal domain and RING finger protein 1

Status: VALIDATED

Source sequence(s)

AC153007

Consensus CDS

CCDS40321.2

UniProtKB/Swiss-Prot

D3YY23

UniProtKB/TrEMBL

A0A182DWE6

Related

ENSMUSP00000158932.2, ENSMUST00000239119.2