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    cyfip1.L cytoplasmic FMR1 interacting protein 1 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 446228, updated on 3-Jul-2024

    Summary

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    Official Symbol
    cyfip1.L
    Official Full Name
    cytoplasmic FMR1 interacting protein 1 L homeolog
    Primary source
    Xenbase:XB-GENE-1194393
    Locus tag
    XELAEV_18013025mg
    See related
    EnsemblRapid:ENSXLAG00005011762
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    shyc; sra1; cyfip1; p140sra-1
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    Genomic context

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    See cyfip1.L in Genome Data Viewer
    Location:
    chromosome: 2L
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (119270808..119334868, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (113455602..113519718, complement)

    Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 2 L homeolog Neighboring gene NIPA magnesium transporter 1 L homeolog Neighboring gene NIPA magnesium transporter 2 L homeolog Neighboring gene fibronectin type III domain-containing protein 9 Neighboring gene gamma-tubulin complex component 5 Neighboring gene carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    cytoplasmic FMR1-interacting protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      119270808..119334868 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018247134.2 → XP_018102623.1  cytoplasmic FMR1-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8J0UFV3
      Related
      ENSXLAP00005034362.1, ENSXLAT00005035245.1

    2. XM_018247133.2 → XP_018102622.1  cytoplasmic FMR1-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1L8HGY3, A0A974DRC7
      Related
      ENSXLAP00005034370.1, ENSXLAT00005035253.1
    Nucleotide Protein Strain
    Heading Accession and Version

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