U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    OR1F2P olfactory receptor family 1 subfamily F member 2 pseudogene [ Homo sapiens (human) ]

    Gene ID: 26184, updated on 2-Nov-2024

    Summary

    Official Symbol
    OR1F2Pprovided by HGNC
    Official Full Name
    olfactory receptor family 1 subfamily F member 2 pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:8196
    See related
    Ensembl:ENSG00000203581 AllianceGenome:HGNC:8196
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    hg91; OR1F2; OLFMF2; OR16-3; OR1F11; OR1F3P
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
    Annotation information
    Note: This gene has been defined as a pseudogene by the Human Olfactory Receptor Data Explorer database. The NCBI RefSeq Project therefore treats this as a pseudogene. [08 Feb 2011]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See OR1F2P in Genome Data Viewer
    Location:
    16p13.3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (3215562..3216546)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (3242672..3243656)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (3265562..3266546)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7129 Neighboring gene tRNA-Pro (anticodon AGG) 1-1 Neighboring gene olfactory receptor family 1 subfamily F member 1 Neighboring gene tRNA-Lys (anticodon CTT) 14-1 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:3261768-3261996 Neighboring gene zinc finger protein 200 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10314 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10315 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr16:3293322-3294521 Neighboring gene MEFV innate immunity regulator, pyrin

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Other Names

    • olfactory receptor OR16-3 pseudogene
    • olfactory receptor, family 1, subfamily F, member 11
    • olfactory receptor, family 1, subfamily F, member 2
    • olfactory receptor, family 1, subfamily F, member 3 pseudogene

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in detection of chemical stimulus involved in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002169.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      BK004665
      Related
      ENST00000570470.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      3215562..3216546
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      3242672..3243656
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)