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    LOC105376100 uncharacterized LOC105376100 [ Homo sapiens (human) ]

    Gene ID: 105376100, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC105376100
    Gene description
    uncharacterized LOC105376100
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 1.8) See more
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    Genomic context

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    See LOC105376100 in Genome Data Viewer
    Location:
    9q21.31
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (79887922..79892009)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (92046291..92050378)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1507 Neighboring gene ankyrin repeat domain-containing protein 36B-like Neighboring gene uncharacterized LOC105376101 Neighboring gene nuclear pore associated protein 1 pseudogene 6 Neighboring gene VISTA enhancer hs1163 Neighboring gene uncharacterized LOC105376099 Neighboring gene OCT4 hESC enhancer GRCh37_chr9:82664925-82665426 Neighboring gene VISTA enhancer hs1004 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:82757334-82758145 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:82771847-82772348 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:82852704-82853204 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:82853205-82853705 Neighboring gene uncharacterized LOC105376103 Neighboring gene nuclear pore associated protein 1 pseudogene 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      79887922..79892009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_929984.3 RNA Sequence

    2. XR_929983.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      92046291..92050378
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007080227.1 RNA Sequence

    2. XR_007080228.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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