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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_047107.1 RefSeqGene
- Range
-
4992..122015
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001376262.1 → NP_001363191.1 neurexin-2-beta isoform 4 precursor
Status: REVIEWED
- Source sequence(s)
-
AP001092, AP001462
- UniProtKB/TrEMBL
-
A0A994J4N8
- Related
- ENSP00000516029.1, ENST00000704781.1
- Conserved Domains (5) summary
-
- smart00282
Location:516 → 666
- LamG; Laminin G domain
- cd00054
Location:694 → 727
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00110
Location:28 → 184
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam01034
Location:1443 → 1482
- Syndecan; Syndecan domain
- pfam02210
Location:946 → 1071
- Laminin_G_2; Laminin G domain
-
NM_001376263.1 → NP_001363192.1 neurexin-2-beta isoform 5 precursor
Status: REVIEWED
- Source sequence(s)
-
AP001092, AP001462
- Consensus CDS
-
CCDS91500.1
- UniProtKB/TrEMBL
- A0A8I5KY42, A0A994J4N8
- Related
- ENSP00000509497.1, ENST00000688050.1
- Conserved Domains (5) summary
-
- smart00282
Location:509 → 659
- LamG; Laminin G domain
- cd00054
Location:687 → 720
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00110
Location:28 → 184
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam01034
Location:1436 → 1475
- Syndecan; Syndecan domain
- pfam02210
Location:939 → 1064
- Laminin_G_2; Laminin G domain
-
NM_001376265.1 → NP_001363194.1 neurexin-2-beta isoform 7 precursor
Status: REVIEWED
- Source sequence(s)
-
AP001092, AP001462
- UniProtKB/TrEMBL
-
A0A994J4N8
- Conserved Domains (5) summary
-
- smart00282
Location:501 → 651
- LamG; Laminin G domain
- cd00054
Location:679 → 712
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00110
Location:28 → 184
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam01034
Location:1428 → 1467
- Syndecan; Syndecan domain
- pfam02210
Location:931 → 1056
- Laminin_G_2; Laminin G domain
-
NM_001376266.1 → NP_001363195.1 neurexin-2-beta isoform 6 precursor
Status: REVIEWED
- Source sequence(s)
-
AP001092, AP001462
- UniProtKB/TrEMBL
-
A0A994J4N8
- Related
- ENSP00000510245.1, ENST00000693456.1
- Conserved Domains (5) summary
-
- smart00282
Location:508 → 658
- LamG; Laminin G domain
- cd00054
Location:686 → 719
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00110
Location:28 → 184
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam01034
Location:1435 → 1474
- Syndecan; Syndecan domain
- pfam02210
Location:938 → 1063
- Laminin_G_2; Laminin G domain
-
NM_001376267.1 → NP_001363196.1 neurexin-2-beta isoform 8 precursor
Status: REVIEWED
- Source sequence(s)
-
AP001092, AP001462
- UniProtKB/TrEMBL
-
A0A994J4N8
- Related
- ENSP00000508669.1, ENST00000689935.1
- Conserved Domains (5) summary
-
- smart00282
Location:509 → 659
- LamG; Laminin G domain
- cd00054
Location:687 → 720
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00110
Location:28 → 184
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam01034
Location:1406 → 1445
- Syndecan; Syndecan domain
- pfam02210
Location:939 → 1064
- Laminin_G_2; Laminin G domain
-
NM_001400681.1 → NP_001387610.1 neurexin-2-beta isoform 9
Status: REVIEWED
- Source sequence(s)
-
AP001092
-
NM_001400682.1 → NP_001387611.1 neurexin-2-beta isoform 10
Status: REVIEWED
- Source sequence(s)
-
AP001092
-
NM_015080.4 → NP_055895.1 neurexin-2-beta isoform alpha-1 precursor
See identical proteins and their annotated locations for NP_055895.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (alpha-1) encodes the longest isoform (alpha-1).
- Source sequence(s)
-
AP001092, AP001462
- Consensus CDS
-
CCDS8077.1
- UniProtKB/Swiss-Prot
- A7E2C1, Q9P2S2, Q9Y2D6
- UniProtKB/TrEMBL
-
A0A994J5C3
- Related
- ENSP00000265459.5, ENST00000265459.11
- Conserved Domains (5) summary
-
- smart00282
Location:516 → 666
- LamG; Laminin G domain
- cd00054
Location:694 → 727
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00110
Location:28 → 184
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam01034
Location:1637 → 1676
- Syndecan; Syndecan domain
- pfam02210
Location:946 → 1074
- Laminin_G_2; Laminin G domain
-
NM_138732.3 → NP_620060.1 neurexin-2-beta isoform alpha-2 precursor
See identical proteins and their annotated locations for NP_620060.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (alpha-2) lacks 3 exons and a portion from a fourth exon in the coding region, as compared to variant alpha-2. It encodes isoform alpha-2 which is missing 4 internal aa fragments but has identical N- and C-termini to isoform alpha-1.
- Source sequence(s)
-
AB023138, AP001092, AP001462
- Consensus CDS
-
CCDS31597.1
- UniProtKB/TrEMBL
-
G5E9G7
- Related
- ENSP00000366782.3, ENST00000377559.7
- Conserved Domains (5) summary
-
- smart00282
Location:485 → 635
- LamG; Laminin G domain
- cd00054
Location:663 → 696
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00110
Location:28 → 184
- LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
- pfam01034
Location:1567 → 1606
- Syndecan; Syndecan domain
- pfam02210
Location:906 → 1034
- Laminin_G_2; Laminin G domain
-
NM_138734.3 → NP_620063.1 neurexin-2-beta isoform beta precursor
See identical proteins and their annotated locations for NP_620063.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (beta) lacks most 5' exons and has an alternate exon at the 5' end, as compared to variant alpha-1. It encodes isoform beta which has a much shorter and different N-terminus than isoform alpha-1 (PMID: 12036300 and PMID: 11944992).
- Source sequence(s)
-
AP001092
- Consensus CDS
-
CCDS8078.1
- UniProtKB/Swiss-Prot
-
P58401
- Related
- ENSP00000301894.2, ENST00000301894.6
- Conserved Domains (4) summary
-
- smart00294
Location:611 → 629
- 4.1m; putative band 4.1 homologues' binding motif
- PHA03247
Location:387 → 586
- PHA03247; large tegument protein UL36; Provisional
- pfam01034
Location:591 → 626
- Syndecan; Syndecan domain
- pfam02210
Location:123 → 271
- Laminin_G_2; Laminin G domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
64606174..64723197 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
64599157..64716433 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)