U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Hspb8 heat shock protein 8 [ Mus musculus (house mouse) ]

    Gene ID: 80888, updated on 2-Nov-2024

    Summary

    Official Symbol
    Hspb8provided by MGI
    Official Full Name
    heat shock protein 8provided by MGI
    Primary source
    MGI:MGI:2135756
    See related
    Ensembl:ENSMUSG00000041548 AllianceGenome:MGI:2135756
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    H11; H11K; Cryac; E2IG1; HSP22; D5Ucla4; HSP20-like
    Summary
    Predicted to enable protein homodimerization activity. Predicted to be involved in cellular response to unfolded protein and positive regulation of aggrephagy. Predicted to be located in cytosol and nucleoplasm. Predicted to be part of protein folding chaperone complex. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Used to study autosomal dominant distal hereditary motor neuronopathy 2. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease axonal type 2L and autosomal dominant distal hereditary motor neuronopathy 2. Orthologous to human HSPB8 (heat shock protein family B (small) member 8). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in heart adult (RPKM 200.3), liver adult (RPKM 87.3) and 12 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Hspb8 in Genome Data Viewer
    Location:
    5 F; 5 56.41 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (116546550..116560923, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (116408491..116422864, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA B230112J18 gene Neighboring gene RIKEN cDNA 4933424N20 gene Neighboring gene STARR-seq mESC enhancer starr_14150 Neighboring gene STARR-seq mESC enhancer starr_14152 Neighboring gene STARR-seq mESC enhancer starr_14153 Neighboring gene predicted gene, 36841 Neighboring gene predicted gene, 42009 Neighboring gene serine/arginine repetitive matrix 4, opposite strand Neighboring gene serine/arginine repetitive matrix 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Gene trapped (1) 
    • Targeted (3)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein homodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in cellular response to unfolded protein IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to unfolded protein IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to unfolded protein ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of aggrephagy IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of aggrephagy ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of protein folding chaperone complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of protein folding chaperone complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of protein folding chaperone complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    heat shock protein beta-8
    Names
    alpha-crystallin C chain
    crystallin, alpha C
    heat shock 27kDa protein 8
    heat shock protein 20-like protein
    small stress protein-like protein HSP22

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_030704.3NP_109629.1  heat shock protein beta-8

      See identical proteins and their annotated locations for NP_109629.1

      Status: VALIDATED

      Source sequence(s)
      AI326838, AK005052
      Consensus CDS
      CCDS19600.1
      UniProtKB/Swiss-Prot
      Q9JK92
      Related
      ENSMUSP00000037007.5, ENSMUST00000036991.5
      Conserved Domains (1) summary
      cd06480
      Location:80170
      ACD_HspB8_like; Alpha-crystallin domain (ACD) found in mammalian 21.6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      116546550..116560923 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)