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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001256627.2 → NP_001243556.1 serine/threonine-protein kinase BRSK2 isoform 1
See identical proteins and their annotated locations for NP_001243556.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes isoform 1.
- Source sequence(s)
-
AC091196, AC136297, AF533879, AK131534
- Consensus CDS
-
CCDS58107.1
- UniProtKB/Swiss-Prot
- B3KVE9, E9PLM7, O60843, O95099, Q5J5B4, Q6ZMQ4, Q8IWQ3, Q8TB60
- Related
- ENSP00000432000.1, ENST00000528841.6
- Conserved Domains (3) summary
-
- smart00220
Location:19 → 269
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cd14340
Location:297 → 350
- UBA_BRSK; UBA domain found in serine/threonine-protein kinase BRSK1, BRSK2 and similar proteins
- cd14081
Location:17 → 270
- STKc_BRSK1_2; Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2
-
NM_001256629.2 → NP_001243558.1 serine/threonine-protein kinase BRSK2 isoform 3
See identical proteins and their annotated locations for NP_001243558.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 3' UTR and contains an alternate exon in the 3' coding region, which results in a frameshift, compared to variant 1. The encoded isoform (3) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC091196, AC136297, AF533877, AK131534
- Consensus CDS
-
CCDS58106.1
- Related
- ENSP00000431152.1, ENST00000531197.5
- Conserved Domains (2) summary
-
- cd14340
Location:297 → 350
- UBA_BRSK; UBA domain found in serine/threonine-protein kinase BRSK1, BRSK2 and similar proteins
- cd14081
Location:17 → 270
- STKc_BRSK1_2; Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2
-
NM_001256630.1 → NP_001243559.1 serine/threonine-protein kinase BRSK2 isoform 4
See identical proteins and their annotated locations for NP_001243559.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, initiates translation at an alternate start codon and uses an alternate splice site in the 3' coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (4) is longer and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC091196, AK131534
- Consensus CDS
-
CCDS58108.1
- UniProtKB/Swiss-Prot
-
Q8IWQ3
- Related
- ENSP00000371614.1, ENST00000382179.5
- Conserved Domains (3) summary
-
- smart00220
Location:77 → 315
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cd14340
Location:343 → 396
- UBA_BRSK; UBA domain found in serine/threonine-protein kinase BRSK1, BRSK2 and similar proteins
- cd14081
Location:62 → 316
- STKc_BRSK1_2; Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2
-
NM_001282218.2 → NP_001269147.1 serine/threonine-protein kinase BRSK2 isoform 5
See identical proteins and their annotated locations for NP_001269147.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in both UTRs and has multiple differences in the coding region, one of which results in a translational frameshift, compared to variant 1. The resulting protein (isoform 5) has a shorter N-terminus and a distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC091196, AK122851, AK297211
- Consensus CDS
-
CCDS60696.1
- UniProtKB/Swiss-Prot
-
Q8IWQ3
- UniProtKB/TrEMBL
-
B4DLY3
- Related
- ENSP00000433235.1, ENST00000528710.5
- Conserved Domains (2) summary
-
- cd14340
Location:237 → 290
- UBA_BRSK; UBA domain found in serine/threonine-protein kinase BRSK1, BRSK2 and similar proteins
- cd14081
Location:1 → 210
- STKc_BRSK1_2; Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2
-
NM_003957.4 → NP_003948.2 serine/threonine-protein kinase BRSK2 isoform 2
See identical proteins and their annotated locations for NP_003948.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. The encoded isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC091196, AC136297, AY166857, DA059153
- Consensus CDS
-
CCDS41590.1
- UniProtKB/TrEMBL
-
A0A140VJF6
- Related
- ENSP00000310697.9, ENST00000308219.13
- Conserved Domains (2) summary
-
- cd14340
Location:297 → 350
- UBA_BRSK; UBA domain found in serine/threonine-protein kinase BRSK1, BRSK2 and similar proteins
- cd14081
Location:17 → 270
- STKc_BRSK1_2; Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2
RNA
-
NR_046331.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) contains two alternate exons in the 3' region, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC091196, AC136297, AF533880, AK131534
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
1389934..1462689
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017018533.2 → XP_016874022.1 serine/threonine-protein kinase BRSK2 isoform X1
-
XM_047427850.1 → XP_047283806.1 serine/threonine-protein kinase BRSK2 isoform X3
-
XM_006718374.3 → XP_006718437.1 serine/threonine-protein kinase BRSK2 isoform X5
- Conserved Domains (3) summary
-
- smart00220
Location:19 → 269
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cd14340
Location:297 → 350
- UBA_BRSK; UBA domain found in serine/threonine-protein kinase BRSK1, BRSK2 and similar proteins
- cd14081
Location:17 → 270
- STKc_BRSK1_2; Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2
-
XM_017018536.2 → XP_016874025.1 serine/threonine-protein kinase BRSK2 isoform X2
-
XM_047427851.1 → XP_047283807.1 serine/threonine-protein kinase BRSK2 isoform X4
-
XM_005253218.4 → XP_005253275.1 serine/threonine-protein kinase BRSK2 isoform X6
- Conserved Domains (3) summary
-
- smart00220
Location:19 → 269
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cd14340
Location:297 → 350
- UBA_BRSK; UBA domain found in serine/threonine-protein kinase BRSK1, BRSK2 and similar proteins
- cd14081
Location:17 → 270
- STKc_BRSK1_2; Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2
-
XM_017018532.2 → XP_016874021.1 serine/threonine-protein kinase BRSK2 isoform X7
-
XM_017018534.2 → XP_016874023.1 serine/threonine-protein kinase BRSK2 isoform X8
-
XM_017018537.2 → XP_016874026.1 serine/threonine-protein kinase BRSK2 isoform X10
-
XM_006718376.3 → XP_006718439.1 serine/threonine-protein kinase BRSK2 isoform X11
See identical proteins and their annotated locations for XP_006718439.1
- Conserved Domains (3) summary
-
- smart00220
Location:2 → 209
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cd14340
Location:237 → 290
- UBA_BRSK; UBA domain found in serine/threonine-protein kinase BRSK1, BRSK2 and similar proteins
- cd14081
Location:1 → 210
- STKc_BRSK1_2; Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2
-
XM_047427852.1 → XP_047283808.1 serine/threonine-protein kinase BRSK2 isoform X12
-
XM_047427853.1 → XP_047283809.1 serine/threonine-protein kinase BRSK2 isoform X15
-
XM_017018535.2 → XP_016874024.1 serine/threonine-protein kinase BRSK2 isoform X9
-
XM_011520461.3 → XP_011518763.1 serine/threonine-protein kinase BRSK2 isoform X13
- Conserved Domains (3) summary
-
- smart00220
Location:2 → 209
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cd14340
Location:237 → 290
- UBA_BRSK; UBA domain found in serine/threonine-protein kinase BRSK1, BRSK2 and similar proteins
- cd14081
Location:1 → 210
- STKc_BRSK1_2; Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2
-
XM_011520462.3 → XP_011518764.1 serine/threonine-protein kinase BRSK2 isoform X14
- Conserved Domains (3) summary
-
- smart00220
Location:2 → 209
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cd14340
Location:237 → 290
- UBA_BRSK; UBA domain found in serine/threonine-protein kinase BRSK1, BRSK2 and similar proteins
- cd14081
Location:1 → 210
- STKc_BRSK1_2; Catalytic domain of Brain-specific serine/threonine-protein kinases 1 and 2
-
XM_047427854.1 → XP_047283810.1 serine/threonine-protein kinase BRSK2 isoform X16
Reference GRCh38.p14 PATCHES
Genomic
-
NW_025791792.1 Reference GRCh38.p14 PATCHES
- Range
-
124200..196955
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333123.1 → XP_054189098.1 serine/threonine-protein kinase BRSK2 isoform X1
-
XM_054333128.1 → XP_054189103.1 serine/threonine-protein kinase BRSK2 isoform X3
-
XM_054333131.1 → XP_054189106.1 serine/threonine-protein kinase BRSK2 isoform X5
-
XM_054333126.1 → XP_054189101.1 serine/threonine-protein kinase BRSK2 isoform X2
-
XM_054333129.1 → XP_054189104.1 serine/threonine-protein kinase BRSK2 isoform X4
-
XM_054333135.1 → XP_054189110.1 serine/threonine-protein kinase BRSK2 isoform X6
-
XM_054333122.1 → XP_054189097.1 serine/threonine-protein kinase BRSK2 isoform X17
-
XM_054333124.1 → XP_054189099.1 serine/threonine-protein kinase BRSK2 isoform X18
-
XM_054333125.1 → XP_054189100.1 serine/threonine-protein kinase BRSK2 isoform X19
-
XM_054333127.1 → XP_054189102.1 serine/threonine-protein kinase BRSK2 isoform X20
-
XM_054333130.1 → XP_054189105.1 serine/threonine-protein kinase BRSK2 isoform X21
-
XM_054333132.1 → XP_054189107.1 serine/threonine-protein kinase BRSK2 isoform X22
-
XM_054333133.1 → XP_054189108.1 serine/threonine-protein kinase BRSK2 isoform X23
-
XM_054333134.1 → XP_054189109.1 serine/threonine-protein kinase BRSK2 isoform X24
-
XM_054333136.1 → XP_054189111.1 serine/threonine-protein kinase BRSK2 isoform X25
-
XM_054333137.1 → XP_054189112.1 serine/threonine-protein kinase BRSK2 isoform X26
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
1461201..1537121
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054370434.1 → XP_054226409.1 serine/threonine-protein kinase BRSK2 isoform X1
-
XM_054370439.1 → XP_054226414.1 serine/threonine-protein kinase BRSK2 isoform X3
-
XM_054370442.1 → XP_054226417.1 serine/threonine-protein kinase BRSK2 isoform X5
-
XM_054370437.1 → XP_054226412.1 serine/threonine-protein kinase BRSK2 isoform X2
-
XM_054370440.1 → XP_054226415.1 serine/threonine-protein kinase BRSK2 isoform X4
-
XM_054370446.1 → XP_054226421.1 serine/threonine-protein kinase BRSK2 isoform X6
-
XM_054370433.1 → XP_054226408.1 serine/threonine-protein kinase BRSK2 isoform X27
-
XM_054370435.1 → XP_054226410.1 serine/threonine-protein kinase BRSK2 isoform X28
-
XM_054370436.1 → XP_054226411.1 serine/threonine-protein kinase BRSK2 isoform X29
-
XM_054370438.1 → XP_054226413.1 serine/threonine-protein kinase BRSK2 isoform X30
-
XM_054370441.1 → XP_054226416.1 serine/threonine-protein kinase BRSK2 isoform X31
-
XM_054370443.1 → XP_054226418.1 serine/threonine-protein kinase BRSK2 isoform X32
-
XM_054370444.1 → XP_054226419.1 serine/threonine-protein kinase BRSK2 isoform X33
-
XM_054370445.1 → XP_054226420.1 serine/threonine-protein kinase BRSK2 isoform X34
-
XM_054370447.1 → XP_054226422.1 serine/threonine-protein kinase BRSK2 isoform X35
-
XM_054370448.1 → XP_054226423.1 serine/threonine-protein kinase BRSK2 isoform X36