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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001134432.2 → NP_001127904.1 5-azacytidine-induced protein 2 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (b) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
BX327318, BX386357, CF528511
- Consensus CDS
-
CCDS46782.1
- UniProtKB/TrEMBL
-
C9JVK8
- Related
- ENSP00000391696.2, ENST00000420543.6
- Conserved Domains (2) summary
-
- cl19219
Location:160 → 221
- DUF342; Protein of unknown function (DUF342)
- cl25732
Location:46 → 233
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_001134433.2 → NP_001127905.1 5-azacytidine-induced protein 2 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (c) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
CB995808, CF528511, DA485515
- Consensus CDS
-
CCDS46783.1
- UniProtKB/TrEMBL
-
C9JVK8
- Related
- ENSP00000335609.6, ENST00000334100.10
-
NM_001271650.2 → NP_001258579.1 5-azacytidine-induced protein 2 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains an alternate exon and uses an alternate splice site in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (d) is shorter than isoform a.
- Source sequence(s)
-
AC098616, BM546093, BX648471, DA485515
- Conserved Domains (2) summary
-
- pfam12845
Location:104 → 153
- TBD; TBD domain
- cl19219
Location:48 → 121
- DUF342; Protein of unknown function (DUF342)
-
NM_022461.5 → NP_071906.1 5-azacytidine-induced protein 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AC098616, AK025592, AK290637, BX648471
- Consensus CDS
-
CCDS2647.1
- UniProtKB/Swiss-Prot
- A8K3M2, C9JB40, H7BXU6, Q86W99, Q9BQF1, Q9H6S1
- Related
- ENSP00000419371.1, ENST00000479665.6
- Conserved Domains (2) summary
-
- pfam12845
Location:216 → 265
- TBD; TBD domain
- cl19219
Location:160 → 233
- DUF342; Protein of unknown function (DUF342)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
28321047..28348824 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005265392.4 → XP_005265449.1 5-azacytidine-induced protein 2 isoform X2
- UniProtKB/Swiss-Prot
- A8K3M2, C9JB40, H7BXU6, Q86W99, Q9BQF1, Q9H6S1
- Conserved Domains (2) summary
-
- pfam12845
Location:216 → 265
- TBD; TBD domain
- cl19219
Location:160 → 233
- DUF342; Protein of unknown function (DUF342)
-
XM_047448718.1 → XP_047304674.1 5-azacytidine-induced protein 2 isoform X2
- UniProtKB/Swiss-Prot
- A8K3M2, C9JB40, H7BXU6, Q86W99, Q9BQF1, Q9H6S1
-
XM_011534009.3 → XP_011532311.1 5-azacytidine-induced protein 2 isoform X1
- Conserved Domains (2) summary
-
- pfam12845
Location:219 → 268
- TBD; TBD domain
- cl19219
Location:163 → 236
- DUF342; Protein of unknown function (DUF342)
-
XM_011534011.3 → XP_011532313.1 5-azacytidine-induced protein 2 isoform X4
- UniProtKB/TrEMBL
-
C9JVK8
-
XM_011534010.3 → XP_011532312.1 5-azacytidine-induced protein 2 isoform X3
- UniProtKB/TrEMBL
-
C9JVK8
- Conserved Domains (1) summary
-
- cl19219
Location:163 → 224
- DUF342; Protein of unknown function (DUF342)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
28323113..28350880 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054347539.1 → XP_054203514.1 5-azacytidine-induced protein 2 isoform X2
- UniProtKB/Swiss-Prot
- A8K3M2, C9JB40, H7BXU6, Q86W99, Q9BQF1, Q9H6S1
-
XM_054347540.1 → XP_054203515.1 5-azacytidine-induced protein 2 isoform X3
- UniProtKB/TrEMBL
-
C9JVK8
-
XM_054347541.1 → XP_054203516.1 5-azacytidine-induced protein 2 isoform X4
- UniProtKB/TrEMBL
-
C9JVK8
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_203326.1: Suppressed sequence
- Description
- NM_203326.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.