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    m6pr.S mannose-6-phosphate receptor (cation dependent) S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 496207, updated on 18-Sep-2024

    Summary

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    Official Symbol
    m6pr.S
    Official Full Name
    mannose-6-phosphate receptor (cation dependent) S homeolog
    Primary source
    Xenbase:XB-GENE-17331542
    Locus tag
    XELAEV_18036687mg
    See related
    EnsemblRapid:ENSXLAG00005021192
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    m6pr
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    Genomic context

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    See m6pr.S in Genome Data Viewer
    Location:
    chromosome: 7S
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (3781096..3790969)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (3833955..3838820)

    Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene alpha-2-macroglobulin-like protein 1 Neighboring gene caspase-2 Neighboring gene polyhomeotic homolog 1 S homeolog Neighboring gene alpha-2-macroglobulin S homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables protein domain specific binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein targeting to lysosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    mannose-6-phosphate receptor (cation dependent) S homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001095395.1 → NP_001088864.1  mannose-6-phosphate receptor (cation dependent) S homeolog

      See identical proteins and their annotated locations for NP_001088864.1

      Status: PROVISIONAL

      Source sequence(s)
      BC088667
      UniProtKB/TrEMBL
      Q5M7G2
      Related
      ENSXLAP00005062335.1, ENSXLAT00005063788.1
      Conserved Domains (1) summary
      pfam02157
      Location:1 → 138
      Man-6-P_recep; Mannose-6-phosphate receptor

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      3781096..3790969
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041570552.1 → XP_041426486.1  mannose-6-phosphate receptor (cation dependent) S homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J1LAH1, A9UMN8
      Related
      ENSXLAP00005062380.1, ENSXLAT00005063834.1

    2. XM_041570554.1 → XP_041426488.1  mannose-6-phosphate receptor (cation dependent) S homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J1LAH1, A9UMN8
      Related
      ENSXLAP00005062354.1, ENSXLAT00005063808.1
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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