hadhb.S hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: hadhb.S
Official Full Name: hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta S homeolog
Primary source: Xenbase:XB-GENE-1009676
Locus tag: XELAEV_18030253mg
See related: EnsemblRapid:ENSXLAG00005005506
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: echb; mtpb; hadhb; mstp029; tp-beta; thiolase
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Genomic context

Location:: chromosome: 5S

Exon count:: 16

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5S	NC_054380.1 (140596197..140615915)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5S	NC_030733.1 (133831765..133851497)

Chromosome 5S - NC_054380.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables acetyl-CoA C-acetyltransferase activity	IEA Inferred from Electronic Annotation more info
enables acyltransferase activity	IEA Inferred from Electronic Annotation more info
enables acyltransferase activity, transferring groups other than amino-acyl groups	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within fatty acid beta-oxidation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytosol	IEA Inferred from Electronic Annotation more info
located_in mitochondrial outer membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta S homeolog

Names: hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit S homeolog; hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001086608.1 → NP_001080077.1 hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta S homeolog

See identical proteins and their annotated locations for NP_001080077.1

Status: PROVISIONAL

Source sequence(s)

BC045222

UniProtKB/TrEMBL

Q7ZTL0

Related

ENSXLAP00005016257.1, ENSXLAT00005016548.1

Conserved Domains (2) summary

PRK08963
Location:50 → 466

fadI; 3-ketoacyl-CoA thiolase; Reviewed

cd00751
Location:51 → 466

thiolase; Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054380.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

140596197..140615915

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_018264238.2 → XP_018119727.1 hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta S homeolog isoform X1

UniProtKB/TrEMBL

A0A1L8G607, A0A974CSZ8

Related

ENSXLAP00005016263.1, ENSXLAT00005016554.1