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    Gpr35 G protein-coupled receptor 35 [ Mus musculus (house mouse) ]

    Gene ID: 64095, updated on 2-Nov-2024

    Summary

    Official Symbol
    Gpr35provided by MGI
    Official Full Name
    G protein-coupled receptor 35provided by MGI
    Primary source
    MGI:MGI:1929509
    See related
    Ensembl:ENSMUSG00000026271 AllianceGenome:MGI:1929509
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    KPG_007
    Summary
    Predicted to enable C-X-C chemokine receptor activity. Involved in cytoskeleton organization. Located in plasma membrane. Is expressed in adipose tissue; bone; gut; lower urinary tract; and spleen. Orthologous to human GPR35 (G protein-coupled receptor 35). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in colon adult (RPKM 5.6), spleen adult (RPKM 3.2) and 12 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Gpr35 in Genome Data Viewer
    Location:
    1 D; 1 46.65 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (92875774..92913984)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (92948052..92986391)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 5033417F24 gene Neighboring gene arginyl aminopeptidase (aminopeptidase B)-like 1 Neighboring gene STARR-seq mESC enhancer starr_01722 Neighboring gene RIKEN cDNA 9430060I03 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:94830898-94831081 Neighboring gene STARR-positive B cell enhancer ABC_E4335 Neighboring gene calpain 10 Neighboring gene predicted gene, 36424 Neighboring gene trans-acting transcription factor 1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables C-X-C chemokine receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables C-X-C chemokine receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein-coupled receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables G protein-coupled receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables chemokine receptor activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    G-protein coupled receptor 35
    Names
    KYNA receptor
    kynurenic acid receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001104529.2NP_001097999.1  G-protein coupled receptor 35

      See identical proteins and their annotated locations for NP_001097999.1

      Status: VALIDATED

      Source sequence(s)
      AC119846
      Consensus CDS
      CCDS15182.1
      UniProtKB/Swiss-Prot
      Q9ES90
      UniProtKB/TrEMBL
      Q3TBY9, Q8CB97
      Related
      ENSMUSP00000139648.2, ENSMUST00000186298.7
      Conserved Domains (1) summary
      cd15164
      Location:35286
      7tmA_GPR35-like; G protein-coupled receptor 35 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
    2. NM_001271766.2NP_001258695.1  G-protein coupled receptor 35

      See identical proteins and their annotated locations for NP_001258695.1

      Status: VALIDATED

      Source sequence(s)
      AC119846
      Consensus CDS
      CCDS15182.1
      UniProtKB/Swiss-Prot
      Q9ES90
      UniProtKB/TrEMBL
      Q3TBY9, Q8CB97
      Related
      ENSMUSP00000070832.7, ENSMUST00000064480.7
      Conserved Domains (1) summary
      cd15164
      Location:35286
      7tmA_GPR35-like; G protein-coupled receptor 35 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
    3. NM_001412853.1NP_001399782.1  G-protein coupled receptor 35

      Status: VALIDATED

      Source sequence(s)
      AC119846
      UniProtKB/Swiss-Prot
      Q9ES90
      UniProtKB/TrEMBL
      Q3TBY9
    4. NM_022320.5NP_071715.3  G-protein coupled receptor 35

      See identical proteins and their annotated locations for NP_071715.3

      Status: VALIDATED

      Source sequence(s)
      AC119846
      Consensus CDS
      CCDS15182.1
      UniProtKB/Swiss-Prot
      Q9ES90
      UniProtKB/TrEMBL
      Q3TBY9, Q8CB97
      Related
      ENSMUSP00000126914.2, ENSMUST00000169198.3
      Conserved Domains (1) summary
      cd15164
      Location:35286
      7tmA_GPR35-like; G protein-coupled receptor 35 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      92875774..92913984
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006529780.4XP_006529843.1  G-protein coupled receptor 35 isoform X2

      See identical proteins and their annotated locations for XP_006529843.1

      UniProtKB/Swiss-Prot
      Q9ES90
      UniProtKB/TrEMBL
      Q3TBY9, Q8CB97
      Conserved Domains (1) summary
      cd15164
      Location:35286
      7tmA_GPR35-like; G protein-coupled receptor 35 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
    2. XM_011248053.4XP_011246355.1  G-protein coupled receptor 35 isoform X2

      See identical proteins and their annotated locations for XP_011246355.1

      UniProtKB/Swiss-Prot
      Q9ES90
      UniProtKB/TrEMBL
      Q3TBY9, Q8CB97
      Conserved Domains (1) summary
      cd15164
      Location:35286
      7tmA_GPR35-like; G protein-coupled receptor 35 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
    3. XM_006529777.4XP_006529840.1  G-protein coupled receptor 35 isoform X1

      UniProtKB/TrEMBL
      Q8CB97
      Conserved Domains (1) summary
      cd15164
      Location:41292
      7tmA_GPR35-like; G protein-coupled receptor 35 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
    4. XM_006529779.5XP_006529842.1  G-protein coupled receptor 35 isoform X2

      See identical proteins and their annotated locations for XP_006529842.1

      UniProtKB/Swiss-Prot
      Q9ES90
      UniProtKB/TrEMBL
      Q3TBY9, Q8CB97
      Conserved Domains (1) summary
      cd15164
      Location:35286
      7tmA_GPR35-like; G protein-coupled receptor 35 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors