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    ythdf3.S YTH N6-methyladenosine RNA binding protein F3 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 447455, updated on 3-Jul-2024

    Summary

    Official Symbol
    ythdf3.S
    Official Full Name
    YTH N6-methyladenosine RNA binding protein F3 S homeolog
    Primary source
    Xenbase:XB-GENE-5753010
    Locus tag
    XELAEV_18033752mg
    See related
    EnsemblRapid:ENSXLAG00005028116
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    ythdf3
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    Genomic context

    See ythdf3.S in Genome Data Viewer
    Location:
    chromosome: 6S
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6S NC_054382.1 (103562702..103576135)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (94894599..94907683)

    Chromosome 6S - NC_054382.1Genomic Context describing neighboring genes Neighboring gene aspartate beta-hydroxylase S homeolog Neighboring gene Sodium/potassium transporting ATPase interacting 3 S homeolog Neighboring gene general transcription factor II-I repeat domain-containing protein 2-like Neighboring gene basic helix-loop-helix family member e22 S homeolog

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    YTH N6-methyladenosine RNA binding protein 3 S homeolog; YTH N6-methyladenosine RNA binding protein F3 S homeolog
    Names
    YTH N(6)-methyladenosine RNA binding protein 3 S homeolog
    YTH domain family, member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001094162.1NP_001087631.1  YTH N6-methyladenosine RNA binding protein F3 S homeolog

      See identical proteins and their annotated locations for NP_001087631.1

      Status: PROVISIONAL

      Source sequence(s)
      BC081017
      UniProtKB/TrEMBL
      A0A974HE94, Q66J89
      Conserved Domains (1) summary
      pfam04146
      Location:404537
      YTH; YT521-B-like domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      103562702..103576135
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018268734.2XP_018124223.1  YTH N6-methyladenosine RNA binding protein 3 S homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J0VL37, A0A974HE94
      Related
      ENSXLAP00005083626.1, ENSXLAT00005085264.1