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    csnk1g2.L casein kinase 1 gamma 2 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 444447, updated on 18-Sep-2024

    Summary

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    Official Symbol
    csnk1g2.L
    Official Full Name
    casein kinase 1 gamma 2 L homeolog
    Primary source
    Xenbase:XB-GENE-865452
    Locus tag
    XELAEV_18006348mg
    See related
    EnsemblRapid:ENSXLAG00005021856
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    CKI; csnk1g2; ck1-gamma
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    Genomic context

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    See csnk1g2.L in Genome Data Viewer
    Location:
    chromosome: 1L
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (112315210..112331444, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (100259877..100276117, complement)

    Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene MAPK interacting serine/threonine kinase 2 L homeolog Neighboring gene BTB domain containing 2 L homeolog Neighboring gene olfactory receptor 11A1 Neighboring gene NXPE family member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC83646

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables histone H2AS1 kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within peptidyl-serine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within positive regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    casein kinase 1 gamma 2 L homeolog
    NP_001086018.1
    XP_018100946.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001092549.1 → NP_001086018.1  casein kinase 1 gamma 2 L homeolog

      See identical proteins and their annotated locations for NP_001086018.1

      Status: PROVISIONAL

      Source sequence(s)
      BC073708
      UniProtKB/TrEMBL
      Q6GN14
      Related
      ENSXLAP00005064220.1, ENSXLAT00005065734.1
      Conserved Domains (2) summary
      COG0515
      Location:45 → 329
      SPS1; Serine/threonine protein kinase [Signal transduction mechanisms]
      cd14126
      Location:45 → 332
      STKc_CK1_gamma; Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1 gamma

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      112315210..112331444 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018245457.1 → XP_018100946.1  casein kinase 1 gamma 2 L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A1L8HWS0, A0A974DYF8
      Related
      ENSXLAP00005064271.1, ENSXLAT00005065785.1
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials