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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001122889.2 → NP_001116361.1 ephrin type-A receptor 7 isoform 2 precursor
See identical proteins and their annotated locations for NP_001116361.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks multiple 3' exons but has an alternate 3' exon, as compared to variant 1. The resulting isoform (2) has a different and shorter C-terminus, as compared to isoform 1.
- Source sequence(s)
-
BX000989
- Consensus CDS
-
CCDS51132.1
- UniProtKB/TrEMBL
-
Q8CC52
- Related
- ENSMUSP00000079735.5, ENSMUST00000080934.11
- Conserved Domains (4) summary
-
- cd10485
Location:30 → 206
- EphR_LBD_A7; Ligand Binding Domain of Ephrin type-A Receptor 7
- cd00063
Location:443 → 534
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:333 → 427
- fn3; Fibronectin type III domain
- pfam07699
Location:275 → 312
- GCC2_GCC3; GCC2 and GCC3
-
NM_001290434.2 → NP_001277363.1 ephrin type-A receptor 7 isoform 3 precursor
See identical proteins and their annotated locations for NP_001277363.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. It encodes isoform 3, which is shorter than isoform 1.
- Source sequence(s)
-
BX000989
- Consensus CDS
-
CCDS71353.1
- UniProtKB/TrEMBL
- A2BDQ4, Q8R381
- Related
- ENSMUSP00000103826.2, ENSMUST00000108191.2
- Conserved Domains (7) summary
-
- cd09548
Location:915 → 984
- SAM_EPH-A7; SAM domain of EPH-A7 subfamily of tyrosine kinase receptors
- smart00454
Location:916 → 983
- SAM; Sterile alpha motif
- cd10485
Location:30 → 206
- EphR_LBD_A7; Ligand Binding Domain of Ephrin type-A Receptor 7
- cd00063
Location:443 → 534
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05066
Location:624 → 890
- PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
- pfam07714
Location:629 → 886
- Pkinase_Tyr; Protein tyrosine kinase
- pfam14575
Location:565 → 624
- EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
-
NM_001420912.1 → NP_001407841.1 ephrin type-A receptor 7 isoform 4 precursor
Status: VALIDATED
- Source sequence(s)
-
BX000989
-
NM_001420913.1 → NP_001407842.1 ephrin type-A receptor 7 isoform 5 precursor
Status: VALIDATED
- Source sequence(s)
-
BX000989
-
NM_001420914.1 → NP_001407843.1 ephrin type-A receptor 7 isoform 6 precursor
Status: VALIDATED
- Source sequence(s)
-
BX000989
-
NM_010141.5 → NP_034271.3 ephrin type-A receptor 7 isoform 1 precursor
See identical proteins and their annotated locations for NP_034271.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
BX000989
- Consensus CDS
-
CCDS18013.1
- UniProtKB/Swiss-Prot
- Q61505, Q61772, Q61773, Q61774, Q8BSU8
- UniProtKB/TrEMBL
-
Q8R381
- Related
- ENSMUSP00000029964.6, ENSMUST00000029964.12
- Conserved Domains (7) summary
-
- cd09548
Location:919 → 988
- SAM_EPH-A7; SAM domain of EPH-A7 subfamily of tyrosine kinase receptors
- smart00454
Location:920 → 987
- SAM; Sterile alpha motif
- cd10485
Location:30 → 206
- EphR_LBD_A7; Ligand Binding Domain of Ephrin type-A Receptor 7
- cd00063
Location:443 → 534
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05066
Location:628 → 894
- PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
- pfam07714
Location:633 → 890
- Pkinase_Tyr; Protein tyrosine kinase
- pfam14575
Location:565 → 628
- EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000070.7 Reference GRCm39 C57BL/6J
- Range
-
28811840..28969391
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006537607.5 → XP_006537670.1 ephrin type-A receptor 7 isoform X9
See identical proteins and their annotated locations for XP_006537670.1
- UniProtKB/Swiss-Prot
-
Q61772
- Related
- ENSMUSP00000103829.3, ENSMUST00000108194.9
- Conserved Domains (3) summary
-
- cd10485
Location:30 → 206
- EphR_LBD_A7; Ligand Binding Domain of Ephrin type-A Receptor 7
- cd00063
Location:443 → 534
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07699
Location:275 → 312
- Ephrin_rec_like; Putative ephrin-receptor like
-
XM_036163651.1 → XP_036019544.1 ephrin type-A receptor 7 isoform X3
- UniProtKB/TrEMBL
-
Q8R381
- Conserved Domains (5) summary
-
- cd09548
Location:838 → 907
- SAM_EPH-A7; SAM domain of EPH-A7 subfamily of tyrosine kinase receptors
- cd00063
Location:367 → 458
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05066
Location:547 → 813
- PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
- pfam14575
Location:484 → 549
- EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
- cl02704
Location:1 → 130
- EphR_LBD; Ligand Binding Domain of Ephrin Receptors
-
XM_036163652.1 → XP_036019545.1 ephrin type-A receptor 7 isoform X4
- UniProtKB/TrEMBL
-
Q8R381
- Conserved Domains (5) summary
-
- cd09548
Location:834 → 903
- SAM_EPH-A7; SAM domain of EPH-A7 subfamily of tyrosine kinase receptors
- cd00063
Location:367 → 458
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05066
Location:543 → 809
- PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
- pfam14575
Location:484 → 545
- EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
- cl02704
Location:1 → 130
- EphR_LBD; Ligand Binding Domain of Ephrin Receptors
-
XM_036163649.1 → XP_036019542.1 ephrin type-A receptor 7 isoform X1
- UniProtKB/TrEMBL
-
Q8R381
- Conserved Domains (5) summary
-
- cd09548
Location:843 → 912
- SAM_EPH-A7; SAM domain of EPH-A7 subfamily of tyrosine kinase receptors
- cd00063
Location:367 → 458
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05066
Location:552 → 818
- PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
- pfam14575
Location:489 → 554
- EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
- cl02704
Location:1 → 130
- EphR_LBD; Ligand Binding Domain of Ephrin Receptors
-
XM_036163650.1 → XP_036019543.1 ephrin type-A receptor 7 isoform X2
- UniProtKB/TrEMBL
-
Q8R381
- Conserved Domains (5) summary
-
- cd09548
Location:839 → 908
- SAM_EPH-A7; SAM domain of EPH-A7 subfamily of tyrosine kinase receptors
- cd00063
Location:367 → 458
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05066
Location:548 → 814
- PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
- pfam14575
Location:489 → 550
- EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
- cl02704
Location:1 → 130
- EphR_LBD; Ligand Binding Domain of Ephrin Receptors
-
XM_036163656.1 → XP_036019549.1 ephrin type-A receptor 7 isoform X7
- Conserved Domains (4) summary
-
- cd00063
Location:367 → 458
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:257 → 351
- fn3; Fibronectin type III domain
- pfam07699
Location:199 → 236
- Ephrin_rec_like; Putative ephrin-receptor like
- cl02704
Location:1 → 130
- EphR_LBD; Ligand Binding Domain of Ephrin Receptors
-
XM_036163654.1 → XP_036019547.1 ephrin type-A receptor 7 isoform X1
- UniProtKB/TrEMBL
-
Q8R381
- Conserved Domains (5) summary
-
- cd09548
Location:843 → 912
- SAM_EPH-A7; SAM domain of EPH-A7 subfamily of tyrosine kinase receptors
- cd00063
Location:367 → 458
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05066
Location:552 → 818
- PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
- pfam14575
Location:489 → 554
- EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
- cl02704
Location:1 → 130
- EphR_LBD; Ligand Binding Domain of Ephrin Receptors
-
XM_036163655.1 → XP_036019548.1 ephrin type-A receptor 7 isoform X1
- UniProtKB/TrEMBL
-
Q8R381
- Conserved Domains (5) summary
-
- cd09548
Location:843 → 912
- SAM_EPH-A7; SAM domain of EPH-A7 subfamily of tyrosine kinase receptors
- cd00063
Location:367 → 458
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05066
Location:552 → 818
- PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
- pfam14575
Location:489 → 554
- EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
- cl02704
Location:1 → 130
- EphR_LBD; Ligand Binding Domain of Ephrin Receptors
RNA
-
XR_004941807.1 RNA Sequence
-
XR_004941806.1 RNA Sequence
-
XR_004941808.1 RNA Sequence