U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Ppp1cc protein phosphatase 1 catalytic subunit gamma [ Mus musculus (house mouse) ]

    Gene ID: 19047, updated on 2-Nov-2024

    Summary

    Official Symbol
    Ppp1ccprovided by MGI
    Official Full Name
    protein phosphatase 1 catalytic subunit gammaprovided by MGI
    Primary source
    MGI:MGI:104872
    See related
    Ensembl:ENSMUSG00000004455 AllianceGenome:MGI:104872
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PP1; PP-1G; dis2m1
    Summary
    Enables protein serine/threonine phosphatase activity. Involved in circadian regulation of gene expression; entrainment of circadian clock by photoperiod; and protein dephosphorylation. Acts upstream of or within blastocyst development; regulation of nucleocytoplasmic transport; and spermatogenesis. Located in mitochondrial outer membrane. Is expressed in several structures, including central nervous system and retina. Orthologous to human PPP1CC (protein phosphatase 1 catalytic subunit gamma). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in testis adult (RPKM 167.5), CNS E11.5 (RPKM 107.2) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Ppp1cc in Genome Data Viewer
    Location:
    5 F; 5 62.2 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (122296338..122313336)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (122154967..122175273)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118568726 Neighboring gene predicted gene, 52786 Neighboring gene VISTA enhancer mm77 Neighboring gene myosin, light polypeptide 2, regulatory, cardiac, slow Neighboring gene STARR-seq mESC enhancer starr_14271 Neighboring gene coiled-coil domain containing 63 Neighboring gene STARR-positive B cell enhancer ABC_E3613 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:122595403-122595586 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:122595588-122595697 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:122634438-122634667 Neighboring gene STARR-seq mESC enhancer starr_14277 Neighboring gene STARR-positive B cell enhancer ABC_E9650 Neighboring gene hydrogen voltage-gated channel 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:122685188-122685492 Neighboring gene tectonic family member 1 Neighboring gene STARR-positive B cell enhancer ABC_E6375 Neighboring gene STARR-positive B cell enhancer ABC_E10345 Neighboring gene RIKEN cDNA 1700112N08 gene Neighboring gene STARR-seq mESC enhancer starr_14278

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (5) 
    • Targeted (3)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables lamin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables lamin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables myosin phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphatase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein domain specific binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein domain specific binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein kinase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein phosphatase 1 binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein phosphatase 1 binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein phosphatase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein serine/threonine phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein serine/threonine phosphatase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein serine/threonine phosphatase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables protein serine/threonine phosphatase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein-containing complex binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein-containing complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within blastocyst development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in circadian regulation of gene expression IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in entrainment of circadian clock by photoperiod IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in glycogen metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within neuron differentiation ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in positive regulation of glial cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of glial cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within protein dephosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in protein dephosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within protein dephosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within protein dephosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of circadian rhythm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of circadian rhythm IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of circadian rhythm ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within regulation of nucleocytoplasmic transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of PTW/PP1 phosphatase complex ISO
    Inferred from Sequence Orthology
    more info
     
    part_of PTW/PP1 phosphatase complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in chromosome, telomeric region IEA
    Inferred from Electronic Annotation
    more info
     
    colocalizes_with chromosome, telomeric region ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cleavage furrow IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dendritic spine IEA
    Inferred from Electronic Annotation
    more info
     
    located_in dendritic spine ISO
    Inferred from Sequence Orthology
    more info
     
    located_in glutamatergic synapse IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in glutamatergic synapse ISO
    Inferred from Sequence Orthology
    more info
     
    located_in kinetochore IEA
    Inferred from Electronic Annotation
    more info
     
    located_in microtubule organizing center IEA
    Inferred from Electronic Annotation
    more info
     
    located_in midbody IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial outer membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nuclear speck IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in postsynapse ISO
    Inferred from Sequence Orthology
    more info
     
    located_in presynapse IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in presynapse ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    serine/threonine-protein phosphatase PP1-gamma catalytic subunit
    Names
    PP1C gamma 1
    PP1C gamma 2
    protein phosphatase 1C catalytic subunit
    NP_001411466.1
    NP_001411468.1
    NP_001411469.1
    NP_001411471.1
    NP_001411472.1
    NP_001411473.1
    NP_001411474.1
    NP_001411475.1
    NP_001411476.1
    NP_001411477.1
    NP_001411478.1
    NP_001411479.1
    NP_001411480.1
    NP_001411481.1
    NP_038664.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001424537.1NP_001411466.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC127266
      Related
      ENSMUSP00000083474.7, ENSMUST00000086294.11
    2. NM_001424539.1NP_001411468.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC127266
    3. NM_001424540.1NP_001411469.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 4

      Status: VALIDATED

      Source sequence(s)
      AC127266
    4. NM_001424542.1NP_001411471.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 5

      Status: VALIDATED

      Source sequence(s)
      AC127266
    5. NM_001424543.1NP_001411472.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 6

      Status: VALIDATED

      Source sequence(s)
      AC127266
    6. NM_001424544.1NP_001411473.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 7

      Status: VALIDATED

      Source sequence(s)
      AC127266
    7. NM_001424545.1NP_001411474.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 8

      Status: VALIDATED

      Source sequence(s)
      AC127266
    8. NM_001424546.1NP_001411475.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 9

      Status: VALIDATED

      Source sequence(s)
      AC127266
    9. NM_001424547.1NP_001411476.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 10

      Status: VALIDATED

      Source sequence(s)
      AC127266
    10. NM_001424548.1NP_001411477.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 11

      Status: VALIDATED

      Source sequence(s)
      AC127266
    11. NM_001424549.1NP_001411478.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 12

      Status: VALIDATED

      Source sequence(s)
      AC127266
      Related
      ENSMUSP00000143146.2, ENSMUST00000197730.2
    12. NM_001424550.1NP_001411479.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 13

      Status: VALIDATED

      Source sequence(s)
      AC127266
    13. NM_001424551.1NP_001411480.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 14

      Status: VALIDATED

      Source sequence(s)
      AC127266
    14. NM_001424552.1NP_001411481.1  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 15

      Status: VALIDATED

      Source sequence(s)
      AC127266
    15. NM_013636.5NP_038664.2  serine/threonine-protein phosphatase PP1-gamma catalytic subunit isoform 1

      See identical proteins and their annotated locations for NP_038664.2

      Status: VALIDATED

      Source sequence(s)
      AC127266
      Consensus CDS
      CCDS19643.1
      UniProtKB/Swiss-Prot
      O09186, O09189, P37139, P63087, Q64679
      UniProtKB/TrEMBL
      Q3U7K1, Q6ZWM8
      Related
      ENSMUSP00000099587.5, ENSMUST00000102528.11
      Conserved Domains (1) summary
      cd07414
      Location:8298
      MPP_PP1_PPKL; PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain

    RNA

    1. NR_156471.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC127266
      Related
      ENSMUST00000132555.8
    2. NR_156472.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC127266
      Related
      ENSMUST00000128309.8
    3. NR_188781.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC127266
    4. NR_188782.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC127266
    5. NR_188783.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC127266
    6. NR_188784.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC127266

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      122296338..122313336
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)