Ctcflos CCCTC-binding factor like, opposite strand [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Ctcflosprovided by MGI
Official Full Name: CCCTC-binding factor like, opposite strandprovided by MGI
Primary source: MGI:MGI:1921411
See related: Ensembl:ENSMUSG00000087382 AllianceGenome:MGI:1921411
Gene type: ncRNA
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: A530094K13; 1300015D01Rik
Expression: Biased expression in subcutaneous fat pad adult (RPKM 4.8), genital fat pad adult (RPKM 4.5) and 4 other tissues See more
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Genomic context

Location:: 2 H3; 2 95.75 cM

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	2	NC_000068.8 (172966542..172974997)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	2	NC_000068.7 (173124749..173133204)

Chromosome 2 - NC_000068.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

LncRNA Ctcflos modulates glucocorticoid receptor-mediated induction of hepatic phosphoenolpyruvate carboxykinase in mice.
Title: LncRNA Ctcflos modulates glucocorticoid receptor-mediated induction of hepatic phosphoenolpyruvate carboxykinase in mice.
LncRNA Ctcflos orchestrates transcription and alternative splicing in thermogenic adipogenesis.
Title: LncRNA Ctcflos orchestrates transcription and alternative splicing in thermogenic adipogenesis.

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General gene information

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Other Names

CCCTC-binding factor (zinc finger protein)-like, opposite strand

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.