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    CDRT15P2 CDRT15 pseudogene 2 [ Homo sapiens (human) ]

    Gene ID: 644694, updated on 2-Nov-2024

    Summary

    Official Symbol
    CDRT15P2provided by HGNC
    Official Full Name
    CDRT15 pseudogene 2provided by HGNC
    Primary source
    HGNC:HGNC:34074
    See related
    AllianceGenome:HGNC:34074
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CDRT15L1
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis (RPKM 4.4) See more
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    Genomic context

    See CDRT15P2 in Genome Data Viewer
    Location:
    17p12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (15764703..15765689)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (15671052..15672038)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (15668017..15669003)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene ZNF286A-TBC1D26 readthrough (NMD candidate) Neighboring gene TBC1D26 antisense RNA 1 Neighboring gene TBC1 domain family member 26 Neighboring gene uncharacterized LOC105371559 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:15672089-15672589 Neighboring gene zinc finger SWIM-type containing 5 pseudogene 1 Neighboring gene RNA, 5S ribosomal pseudogene 436

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Other Names

    • CMT1A duplicated region transcript 15 pseudogene 2
    • CMT1A duplicated region transcript 15-like 1

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033865.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC005324, AC015922

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      15764703..15765689
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      15671052..15672038
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)