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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_012548.1Â RefSeqGene
- Range
-
4990..46582
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001204466.2 → NP_001191395.1  RNA-binding protein 10 isoform 3
See identical proteins and their annotated locations for NP_001191395.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an in-frame exon in the coding region, compared to variant 1. The encoded isoform (3) is shorter than isoform 1.
- Source sequence(s)
-
AK292758, AL513366, AW248804, BX537969, DB183041
- Consensus CDS
-
CCDS56600.1
- UniProtKB/TrEMBL
-
Q7Z3D7
- Related
- ENSP00000329659.6, ENST00000345781.10
- Conserved Domains (6) summary
-
- smart00547
Location:138 → 162
- ZnF_RBZ; Zinc finger domain
- sd00029
Location:140 → 159
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- cd16167
Location:487 → 550
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
- pfam01585
Location:781 → 825
- G-patch; G-patch domain
- cd12754
Location:221 → 307
- RRM2_RBM10; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 10 (RBM10)
- cl17169
Location:67 → 134
- RRM_SF; RNA recognition motif (RRM) superfamily
-
NM_001204467.2 → NP_001191396.1  RNA-binding protein 10 isoform 4
See identical proteins and their annotated locations for NP_001191396.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses and alternate splice site in the coding region, compared to variant 1. The encoded isoform (4) is shorter than isoform 1.
- Source sequence(s)
-
AL513366, AW248804, D50912, DB183041
- UniProtKB/TrEMBL
-
Q7Z3D7
- Conserved Domains (7) summary
-
- smart00547
Location:215 → 239
- ZnF_RBZ; Zinc finger domain
- COG0724
Location:21 → 232
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12753
Location:127 → 211
- RRM1_RBM10; RNA recognition motif 1 in vertebrate RNA-binding protein 10 (RBM10)
- cd12754
Location:298 → 383
- RRM2_RBM10; RNA recognition motif 2 in vertebrate RNA-binding protein 10 (RBM10)
- sd00029
Location:217 → 236
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- cd16167
Location:563 → 626
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
- pfam01585
Location:857 → 899
- G-patch; G-patch domain
-
NM_001204468.2 → NP_001191397.1  RNA-binding protein 10 isoform 5
See identical proteins and their annotated locations for NP_001191397.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses an alternate splice site in the 5' coding region and initiates translation at an upstream in-frame start codon, compared to variant 1. The encoded isoform (5) has a distinct N-terminus and is longer than isoform 1.
- Source sequence(s)
-
AL513366, AW248804, BX537969, DB183041
- Consensus CDS
-
CCDS75969.1
- UniProtKB/TrEMBL
-
Q7Z3D7
- Related
- ENSP00000328848.8, ENST00000329236.8
- Conserved Domains (8) summary
-
- smart00547
Location:280 → 304
- ZnF_RBZ; Zinc finger domain
- COG0724
Location:86 → 297
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12753
Location:192 → 276
- RRM1_RBM10; RNA recognition motif 1 in vertebrate RNA-binding protein 10 (RBM10)
- cd12754
Location:363 → 449
- RRM2_RBM10; RNA recognition motif 2 in vertebrate RNA-binding protein 10 (RBM10)
- TIGR01661
Location:201 → 446
- ELAV_HUD_SF; ELAV/HuD family splicing factor
- sd00025
Location:282 → 301
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- pfam01585
Location:923 → 967
- G-patch; G-patch domain
- cd16167
Location:629 → 692
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
-
NM_005676.5 → NP_005667.2  RNA-binding protein 10 isoform 1
See identical proteins and their annotated locations for NP_005667.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform (1).
- Source sequence(s)
-
AW248804, BC008733, DB183041
- Consensus CDS
-
CCDS14274.1
- UniProtKB/Swiss-Prot
- A0A0A0MR66, C4AM81, P98175, Q14136, Q5JRR2, Q9BTE4, Q9BTX0, Q9NTB1
- UniProtKB/TrEMBL
- A0A0S2Z4W4, Q7Z3D7
- Related
- ENSP00000366829.3, ENST00000377604.8
- Conserved Domains (7) summary
-
- smart00547
Location:215 → 239
- ZnF_RBZ; Zinc finger domain
- COG0724
Location:21 → 232
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- sd00029
Location:217 → 236
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- cd16167
Location:564 → 627
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
- pfam01585
Location:858 → 902
- G-patch; G-patch domain
- cd12753
Location:128 → 211
- RRM1_RBM10; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 10 (RBM10)
- cd12754
Location:298 → 384
- RRM2_RBM10; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 10 (RBM10)
-
NM_152856.3 → NP_690595.1  RNA-binding protein 10 isoform 2
See identical proteins and their annotated locations for NP_690595.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon and uses and alternate splice site in the coding region, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
BC003089, DB183041
- Consensus CDS
-
CCDS78478.1
- UniProtKB/TrEMBL
- A0A0S2Z4X1, Q7Z3D7
- Related
- ENSP00000486115.1, ENST00000628161.2
- Conserved Domains (6) summary
-
- smart00547
Location:138 → 162
- ZnF_RBZ; Zinc finger domain
- sd00029
Location:140 → 159
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- cd16167
Location:486 → 549
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
- pfam01585
Location:780 → 824
- G-patch; G-patch domain
- cd12754
Location:221 → 306
- RRM2_RBM10; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding protein 10 (RBM10)
- cl17169
Location:67 → 134
- RRM_SF; RNA recognition motif (RRM) superfamily
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11Â Reference GRCh38.p14 Primary Assembly
- Range
-
47145221..47186813
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005272677.5 → XP_005272734.1  RNA-binding protein 10 isoform X1
- UniProtKB/TrEMBL
-
Q7Z3D7
- Conserved Domains (7) summary
-
- smart00547
Location:280 → 304
- ZnF_RBZ; Zinc finger domain
- COG0724
Location:86 → 297
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12753
Location:192 → 276
- RRM1_RBM10; RNA recognition motif 1 in vertebrate RNA-binding protein 10 (RBM10)
- cd12754
Location:363 → 448
- RRM2_RBM10; RNA recognition motif 2 in vertebrate RNA-binding protein 10 (RBM10)
- sd00025
Location:282 → 301
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- pfam01585
Location:922 → 966
- G-patch; G-patch domain
- cd16167
Location:628 → 691
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
-
XM_047442551.1 → XP_047298507.1  RNA-binding protein 10 isoform X4
-
XM_005272678.5 → XP_005272735.1  RNA-binding protein 10 isoform X2
- UniProtKB/TrEMBL
-
Q7Z3D7
- Conserved Domains (7) summary
-
- smart00547
Location:203 → 227
- ZnF_RBZ; Zinc finger domain
- COG0724
Location:276 → 381
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12754
Location:286 → 372
- RRM2_RBM10; RNA recognition motif 2 in vertebrate RNA-binding protein 10 (RBM10)
- sd00025
Location:205 → 224
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- pfam01585
Location:846 → 890
- G-patch; G-patch domain
- cd16167
Location:552 → 615
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
- cl17169
Location:132 → 199
- RRM_SF; RNA recognition motif (RRM) superfamily
-
XM_005272679.5 → XP_005272736.1  RNA-binding protein 10 isoform X3
- UniProtKB/TrEMBL
-
Q7Z3D7
- Conserved Domains (7) summary
-
- smart00547
Location:203 → 227
- ZnF_RBZ; Zinc finger domain
- COG0724
Location:276 → 380
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12754
Location:286 → 371
- RRM2_RBM10; RNA recognition motif 2 in vertebrate RNA-binding protein 10 (RBM10)
- sd00025
Location:205 → 224
- zf-RanBP2; RanBP2-type Zn finger [structural motif]
- pfam01585
Location:845 → 889
- G-patch; G-patch domain
- cd16167
Location:551 → 614
- OCRE_RBM10; OCRE domain found in RNA-binding protein 10 (RBM10) and similar proteins
- cl17169
Location:132 → 199
- RRM_SF; RNA recognition motif (RRM) superfamily
-
XM_047442554.1 → XP_047298510.1  RNA-binding protein 10 isoform X7
-
XM_047442552.1 → XP_047298508.1  RNA-binding protein 10 isoform X5
-
XM_047442555.1 → XP_047298511.1  RNA-binding protein 10 isoform X8
-
XM_047442553.1 → XP_047298509.1  RNA-binding protein 10 isoform X6
-
XM_047442556.1 → XP_047298512.1  RNA-binding protein 10 isoform X9
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1Â Alternate T2T-CHM13v2.0
- Range
-
46554946..46596509
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054327935.1 → XP_054183910.1  RNA-binding protein 10 isoform X1
-
XM_054327938.1 → XP_054183913.1  RNA-binding protein 10 isoform X4
-
XM_054327936.1 → XP_054183911.1  RNA-binding protein 10 isoform X2
-
XM_054327937.1 → XP_054183912.1  RNA-binding protein 10 isoform X3
-
XM_054327941.1 → XP_054183916.1  RNA-binding protein 10 isoform X7
-
XM_054327939.1 → XP_054183914.1  RNA-binding protein 10 isoform X5
-
XM_054327942.1 → XP_054183917.1  RNA-binding protein 10 isoform X8
-
XM_054327940.1 → XP_054183915.1  RNA-binding protein 10 isoform X6
-
XM_054327943.1 → XP_054183918.1  RNA-binding protein 10 isoform X9