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    1600029O15Rik RIKEN cDNA 1600029O15 gene [ Mus musculus (house mouse) ]

    Gene ID: 665268, updated on 8-Feb-2024

    Summary

    Official Symbol
    1600029O15Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1600029O15 geneprovided by MGI
    Gene description
    ribosomal protein L17 pseudogene
    Primary source
    MGI:MGI:3045362
    See related
    Ensembl:ENSMUSG00000121691 AllianceGenome:MGI:3045362
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in CNS E18 (RPKM 2.8), CNS E14 (RPKM 2.7) and 4 other tissues See more
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    Genomic context

    See 1600029O15Rik in Genome Data Viewer
    Location:
    9 B; 9 31.63 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (58110180..58116091)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (58202897..58208808)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene immunoglobulin superfamily containing leucine-rich repeat Neighboring gene predicted gene, 39344 Neighboring gene STARR-positive B cell enhancer ABC_E10552 Neighboring gene immunoglobulin superfamily containing leucine-rich repeat 2 Neighboring gene microRNA 6385 Neighboring gene promyelocytic leukemia Neighboring gene STARR-positive B cell enhancer ABC_E2891 Neighboring gene stomatin-like 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033522.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC160976
      Related
      ENSMUST00000179787.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      58110180..58116091
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)