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    Trh thyrotropin releasing hormone [ Mus musculus (house mouse) ]

    Gene ID: 22044, updated on 2-Nov-2024

    Summary

    Official Symbol
    Trhprovided by MGI
    Official Full Name
    thyrotropin releasing hormoneprovided by MGI
    Primary source
    MGI:MGI:98823
    See related
    Ensembl:ENSMUSG00000005892 AllianceGenome:MGI:98823
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Trf; Pro-TRH
    Summary
    This gene encodes a member of the thyrotropin-releasing hormone family. Cleavage of the encoded proprotein releases mature thyrotropin-releasing hormone, which is a tripeptide hypothalamic regulatory hormone. The mouse proprotein contains five thyrotropin-releasing hormone tripeptides. Thyrotropin-releasing hormone is involved in the regulation and release of thyroid-stimulating hormone, as well as prolactin. Disruption of this gene results in hypothyroidism, elevated thyroid-stimulating hormone levels, and hyperglycemia. [provided by RefSeq, Apr 2013]
    Expression
    Biased expression in frontal lobe adult (RPKM 13.0), testis adult (RPKM 2.3) and 5 other tissues See more
    Orthologs
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    Genomic context

    See Trh in Genome Data Viewer
    Location:
    6 D1; 6 41.03 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (92219042..92221631, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (92242061..92244650, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 2, group C, member 2 Neighboring gene mitochondrial ribosomal protein S25 Neighboring gene STARR-seq mESC enhancer starr_16664 Neighboring gene rabenosyn, RAB effector Neighboring gene predicted gene, 30688 Neighboring gene predicted gene 44803 Neighboring gene prickle planar cell polarity protein 2 Neighboring gene predicted gene, 38862

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables thyrotropin-releasing hormone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables thyrotropin-releasing hormone activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within adult walking behavior IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in eating behavior IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in eating behavior IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in eating behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in histamine metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in histamine metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in histamine metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in hormone-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of feeding behavior IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of feeding behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of glutamate secretion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of glutamate secretion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of glutamate secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of gamma-aminobutyric acid secretion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of gamma-aminobutyric acid secretion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of gamma-aminobutyric acid secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of insulin secretion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of insulin secretion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of insulin secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to corticosterone IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to ethanol IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to glucose IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in secretory granule IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in secretory granule IEA
    Inferred from Electronic Annotation
    more info
     
    located_in secretory granule ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    thyrotropin releasing hormone
    Names
    TSH-releasing factor
    pro-thyrotropin-releasing hormone
    prothyroliberin
    protirelin
    thyrotropin-releasing factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009426.3NP_033452.2  thyrotropin releasing hormone preproprotein

      See identical proteins and their annotated locations for NP_033452.2

      Status: REVIEWED

      Source sequence(s)
      AC164642, AI836004, AK010666, CF951860
      Consensus CDS
      CCDS20375.1
      UniProtKB/Swiss-Prot
      Q62361, Q7TMT4
      Related
      ENSMUSP00000006046.5, ENSMUST00000006046.5
      Conserved Domains (1) summary
      pfam05438
      Location:24223
      TRH; Thyrotropin-releasing hormone (TRH)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      92219042..92221631 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)