U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Angptl4 angiopoietin-like 4 [ Mus musculus (house mouse) ]

    Gene ID: 57875, updated on 14-Nov-2024

    Summary

    Official Symbol
    Angptl4provided by MGI
    Official Full Name
    angiopoietin-like 4provided by MGI
    Primary source
    MGI:MGI:1888999
    See related
    Ensembl:ENSMUSG00000002289 AllianceGenome:MGI:1888999
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Arp4; Bk89; Fiaf; Ng27; Pgar; Hfarp; Pgarg; Pp1158
    Summary
    Enables enzyme inhibitor activity. Involved in negative regulation of apoptotic process; negative regulation of lipoprotein lipase activity; and triglyceride homeostasis. Acts upstream of or within negative regulation of endothelial cell apoptotic process. Located in extracellular space. Is expressed in several structures, including central nervous system; genitourinary system; heart; hemolymphoid system gland; and integumental system. Orthologous to human ANGPTL4 (angiopoietin like 4). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in subcutaneous fat pad adult (RPKM 130.4), genital fat pad adult (RPKM 109.0) and 14 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Angptl4 in Genome Data Viewer
    Location:
    17 B1; 17 17.98 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (33993874..34000549, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (33774900..33781575, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene membrane associated ring-CH-type finger 2 Neighboring gene STARR-positive B cell enhancer ABC_E7520 Neighboring gene RAB11B, member RAS oncogene family Neighboring gene STARR-positive B cell enhancer ABC_E82 Neighboring gene RAB11B, member RAS oncogene family, opposite strand 1 Neighboring gene predicted gene, 53997 Neighboring gene STARR-seq mESC enhancer starr_42411 Neighboring gene STARR-positive B cell enhancer ABC_E956 Neighboring gene STARR-positive B cell enhancer ABC_E2482 Neighboring gene KN motif and ankyrin repeat domains 3 Neighboring gene ribosomal protein S28

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables enzyme inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables enzyme inhibitor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in angiogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in blood coagulation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to starvation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    acts_upstream_of endothelial cell apoptotic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of apoptotic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within negative regulation of endothelial cell apoptotic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of lipoprotein lipase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in negative regulation of lipoprotein lipase activity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of lipid metabolic process NAS
    Non-traceable Author Statement
    more info
    PubMed 
    involved_in protein unfolding IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein unfolding ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in triglyceride homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in triglyceride homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in collagen-containing extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
    PubMed 

    General protein information

    Preferred Names
    angiopoietin-related protein 4
    Names
    425O18-1
    angiopoietin-like protein 4
    fasting-induced adipose factor
    fibrinogen/angiopoietin-related protein
    hepatic fibrinogen/angiopoietin-related protein
    major histocompatibility complex region NG27
    secreted protein Bk89

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_020581.2NP_065606.2  angiopoietin-related protein 4 precursor

      See identical proteins and their annotated locations for NP_065606.2

      Status: VALIDATED

      Source sequence(s)
      AK014564, AW495750, BY783212
      Consensus CDS
      CCDS28629.1
      UniProtKB/Swiss-Prot
      Q78ZJ9, Q9JHX7, Q9JLX7, Q9Z1P8
      UniProtKB/TrEMBL
      A0A068BEP2
      Related
      ENSMUSP00000002360.10, ENSMUST00000002360.17
      Conserved Domains (2) summary
      cd00087
      Location:187404
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...
      pfam08702
      Location:104133
      Fib_alpha; Fibrinogen alpha/beta chain family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      33993874..34000549 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)