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Sample GSM9988 Query DataSets for GSM9988
Status Public on Sep 17, 2003
Title 32+
Sample type RNA
 
Source name NB 4 cells
Organism Homo sapiens
Extracted molecule total RNA
 
Description NB 4 cells were treated with 5 mM valproic acid for 32 hours to induce apoptosis. Apoptosis was measured using annexin V-FITC and propidium iodide (PI) according to the manufacturer's protocol. RNA was also isolated using Trizol. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo sapiens, RNA degradation, apoptosis, microarray
 
Submission date Sep 12, 2003
Last update date May 27, 2005
Contact name Herbert Auer
E-mail(s) auer-2@medctr.osu.edu
Phone 614 247 7116
URL http://www.dnaarrays.org
Organization name Human Cancer Genetics
Department
Street address 420 West 12th Ave
City Columbus
State/province OH
ZIP/Postal code 43210
Country USA
 
Platform ID GPL96
Series (1)
GSE666 RNA degradation and apoptosis

Data table header descriptions
ID_REF
VALUE expression estimate according to dchip (PM-only model)
STANDARD_ERROR standard error according to dchip (PM-only model)

Data table
ID_REF VALUE STANDARD_ERROR
AFFX-BioB-5_at 847.119 15.7693
AFFX-BioB-M_at 1080.35 14.4663
AFFX-BioB-3_at 1063.05 22.0726
AFFX-BioC-5_at 2412.86 63.8548
AFFX-BioC-3_at 1749.6 24.5337
AFFX-BioDn-5_at 2219.29 29.3921
AFFX-BioDn-3_at 7930.57 192.185
AFFX-CreX-5_at 9369.9 311.197
AFFX-CreX-3_at 14332 238.207
AFFX-DapX-5_at 152.841 6.41597
AFFX-DapX-M_at 214.445 4.97578
AFFX-DapX-3_at 102.049 4.07179
AFFX-LysX-5_at 39.4411 2.00021
AFFX-LysX-M_at 643.646 9.48861
AFFX-LysX-3_at 133.895 6.28912
AFFX-PheX-5_at 76.9836 4.2066
AFFX-PheX-M_at 96.2852 3.9616
AFFX-PheX-3_at 250.236 10.4918
AFFX-ThrX-5_at 152.876 4.72459
AFFX-ThrX-M_at 58.0983 4.86254

Total number of rows: 22283

Table truncated, full table size 581 Kbytes.




Supplementary data files not provided

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