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Sample GSM995526 Query DataSets for GSM995526
Status Public on Aug 31, 2012
Title PSU_RnaSeq_MEL_DMSO_2.0pct_single (superseded by GSE93476)
Sample type SRA
Source name MEL
Organism Mus musculus
Characteristics lab: PSU-m
lab description: Hardison - Penn State University
datatype: RnaSeq
datatype description: Sequencing analysis of RNA expression
cell: MEL
cell organism: mouse
cell description: Leukemia (K562 analog)
cell sex: M
treatment: DMSO_2.0pct
treatment description: 5 d with 2% Dimethyl sufloxide (DMSO) (Weissman)
labexpid: single
age: immortalized
age description: Immortal cells
labexpid: single
readtype: 1x45
readtype description: Single 45 nt reads
replicate: 1
strain: Unknown
strain description: Unknown strain origin
Biomaterial provider Weissman lab
Treatment protocol DMSO_2.0pct
Extracted molecule polyA RNA
Extraction protocol For more information, see
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina HiSeq 2000
Description ****************************
GSM995526 record metadata submitted on Aug 31 2012 may be obsolete, up to date experimental metadata was resubmitted by ENCODE DCC and is available at GSE93476
Data processing
Submission date Aug 31, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL13112
Series (2)
GSE40522 ENCODE PSU Hardison RnaSeq
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
Reanalyzed by GSE80797
Superseded by GSE93476
SRA SRX181750
BioSample SAMN01141820
Named Annotation GSM995526_mm9_wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dSigRep1.bigWig
Named Annotation GSM995526_mm9_wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dSigRep2.bigWig

Supplementary file Size Download File type/resource
GSM995526_mm9_wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dSigRep1.bigWig 177.2 Mb (ftp)(http) BIGWIG
GSM995526_mm9_wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dSigRep2.bigWig 124.3 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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